KEGG   Oncorhynchus keta (chum salmon): 118400118
Entry
118400118         CDS       T09424                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30-like isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118400118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118400118
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118400118
 Complex B
    118400118
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    118400118
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730 RskA_C
Other DBs
NCBI-GeneID: 118400118
NCBI-ProteinID: XP_035652510
LinkDB
Position
2:37965479..38005933
AA seq 246 aa
MGNSLTTSARMSEDLLKQLGSYKAQLQQVEAALSTDPENEDLLKLQKDLSEVIDLTKDLL
TSQPSEGTATANSSDAAPLKHRWSVGDRCMTVWSQDGQVYEAEIEEIDGENGTAAITFSG
YGNAEVVPLQNLKPAEEGKHSEDDGKSKSRKEQIADQREYKKKKAQKKVLRMKELEQERE
DQKSKWQSFNNKAYNKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTTYHDTSKYNV
RHLMPQ
NT seq 741 nt   +upstreamnt  +downstreamnt
atgggaaacagcctgaccacctctgctaggatgtcagaggatttgttgaaacagttgggc
agctacaaagcacagttgcaacaagtggaagccgccttgtcaaccgaccctgaaaatgaa
gaccttctcaaattacagaaagacttatcggaagtcatagacttaacaaaagacctcctg
acgtcgcagccctccgaaggtactgctactgccaacagctcagatgcagcccccctgaaa
cataggtggagcgttggggacaggtgtatgactgtgtggagtcaggatggacaggtgtat
gaagctgagattgaggagatagacggcgagaatggcacggcggccatcaccttctccggc
tacgggaacgcagaggtggtgccactgcagaacctcaagcctgccgaggagggcaagcac
tctgaggatgacgggaaatccaagtccaggaaggagcagatagcagaccagagggagtac
aagaagaagaaggcccagaagaaggtgctgaggatgaaggaactggaacaggagcgagaa
gaccagaaatccaagtggcagagttttaacaacaaggcctataacaagaacaagaaagga
caggtgaagaggagtatatttgcatcgccggagagtgtaaacggcaaggtgggagtagga
acatgtggcatagcagacaaacctatgaccacgtatcacgacacatccaaatataacgtc
aggcatctaatgccacagtga

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