Oncorhynchus keta (chum salmon): 118400943
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Entry
118400943 CDS
T09424
Name
(RefSeq) filamin-C-like
KO
K27393
filamin-C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118400943
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118400943
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118400943
Intermediate filaments
Intermediate filament-binding proteins
118400943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
Big_13
Motif
Other DBs
NCBI-GeneID:
118400943
NCBI-ProteinID:
XP_052330567
LinkDB
All DBs
Position
22:3932407..4011003
Genome browser
AA seq
2710 aa
AA seq
DB search
MSSYNAHYYEDSHPPQYYQGTDNSEGDKEDEMPATEKDLAEDAPWKKIQQNTFTRWCNEH
LKGINKSITDLQKDVGDGLKLIGLLEVLSQKKMYRKHHNRPNFRQMKLENVSVALEFLDG
EHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEEAKELTPKQKLLGWI
QNKVPELPINNFHRDWRDGKALGALVDNCAPGLCPDWQAWDPNQPVENAREAMQQADDWL
GVPQVINPEEIVDPEVDEQSMMTYLSQFPKSKLRPGAPLKPKGVQLYPKKAKSYGPGIEA
NGNMVLKPAVFTVETLEAGQAEVLVYVIDPEGHTEEAKVVFNNDKNRTHTVIYIPKVEGA
HKVKVLFAGQDVDKSPYTVNVAKAIGDPNKVQAKGPGLEATSNMANKPTYLDIYTAGAGN
GDVSVVIVDPEGKKDTVKLILENKGDSVFRCTYRPMLEGPHTIHILFAGQEILKSPFKVQ
ITEAINADTCRATGRGLQPKGVGVKEVADFKVFTKGAGNGELKVSVTGPCGDEEPVKVKD
IGDGVYECEYLPNQTGKYTVNITWGGQPIPHSPFDVEVSEVAGPQKVRAWGPGLLTGRVG
KSADFVVEAIGTEVGTLGFLIEGPSQAKIECDDKGDGSCDVRYWPTKPDYYAVHVICDDE
DIKGSPFMAHILSATNDCFPDKVKAFGPGLEPIGVIVNKPAEFTIDARGAGKGHLKIYAK
DSESVTIDIKITDKGDGTFLCAYVPIKPIKHTIIITWGDVKVPNSHFRVIVGEGCHPDKV
KVYGPGVEKTGLKANEPNFFTVDCAEAGQGDISIGIKCAPGVVGPAEADINFDIIKNDDD
TFTVKYTPPGAGKYTIMVLFAEQEIPISPFRVKVNRSHDAGNVRAEGPGLNKTGVEAGTP
THFTIFTQGAGKAKPKVQFPAAELKGEAVRDFEIIDNHDNSYTVKYTAVHQGQMTISVTH
GGDPIPKSPFNITVALPVDLGKVKVAGLDTKVEVGKDQEFYINTQGAGGKGEVAVKMTSP
SGRPILYKLDSETANGAHSVKYIPPEEGPYKVDISYDCNPVPGSPFAVEGVMPADPSKVR
AYGPGLKGGIVGKPAPFAIDTNGAGLGRLGLTVEGSCKAKIECQDNGHSTCSVSYLPTEA
GEYAINILFGKQHIPGSPFKAAVKPCLDPSQVTASGPGLDKAKAGEPAYFTVDCTSAGEA
ELTIEIVSESGAESEVHIQKTAEGSFSVTYIPPFHGTHTITIKYGGHVVPNFPALIRVEP
AVDTGGVQVYGPGVQPRGVIKEVTTHFIVDARKMPKTFGDHLKACIINPSGTNTDTYITN
RGDGTFRVEYTAYEDGMHVIEVLYDEVAIPKSPFRVSVVEGCDPTRVRAYGPGLEGGLIN
TPNCFTVETRGAGTGGLGLTIEGASEAKMTCKDNKDGSCSVEYVPFTPGEYDVNINFGGH
PIPGSPFRVPVRDVVDPSKVKCSGLGLGDRVRAHLPQTFTVDTIQAGQANLEVSLIGPSG
SEPVAVKNNSDGTHTVNYTPVRDGPYTVSVKYGDQEVPRSPFKVRSQPGHDASKVCASGP
GLDKSGVPASLPVEFTIDARDAGEGLLTVQILDQECKPKKATIYDNRDGTYTVSYVPDST
GPYTIMIKYGGDEIPYSPYHILALPTGDASKCLLTVSIGGHALASGLTKMQVHEEAIISV
DTKAAGKGKVTCSVMTPEGVELDMDVQENRDGTFDIYYTAPEPGKYVITIRFGGQHIPKS
PFHVTATNEPIVLSDGMDQFRPLNLVIPFTVQQGPITGEVRMPYGKTAHPYIINDIDGTI
TVKSNPTENGLHEMDIKYEGNHIPGSPLQFYVDAMNSGLVTAYGPGLCQGSINKPVTFIV
VTKNAGEGGLSLAVEGPSKAKITCKDNKDGTCTVSYLPTSPGDYKIIVKFDNKHIAGSPF
TAKITGDDSIRTSQLNVGTAADLSLKITESDLSLLTANIRAPSGNEEPCLLKRLPSRHIG
ISFTPKEVGEHEVSVKKNGKHVTNSPFKIQVGQSDIGEASRVKAFGKGLVEAHTFKMAEF
FVDTRDAGYGGLGLSIEGPSKVDINCEVVEDGTCRVSYCPTEPGNHIINIKFSDKHIPGS
PFTVKVTGEGRMKESITRKRTAPAIASIGSACGLNLKIPGNWFQMVSAQERMTRTFTRSS
DTYTRKERTEISKMRGGETKREVRVEESTQTGGTGGASPFKDVFGEFLGRESLASFAGIP
ATVTPGETATKGSMMAQVTSPGGKTEQAEIIDGGDNTYSVRFVPQEMGAHTVNVKYSGQH
VPGSPFQFTVGPLGEGGSHKVRAGGTGLERGVAGAPTEFSIWTREAGAGGLSIAVEGPSK
AEISFEDRKDGSCRVVYIVQDPGDYEVSIKFNNEHIPDSPFVVPIATLSDEACRLTVTSL
QEKDLKVNQEASFAVQCNGARGVVDAKVHTPSGSAEECYITDLDSDKNVIRFIPRENGVH
SIDVKFNGSHIPGSPFNVRVGEAGQAGDPGMVTVYGPGLDGGSTGVASEFVVNTCNAGSG
ALSVTIDGPSKVKMDCSDCLDGYKVIYTPMAPGNYLITIKYGGPNHIVGSPFKAKVTGTR
LSGGHSLHETSSVLVQTITKTSKVAGAYSTSSSSKLTSDASKVVCRGGGLTKALVGQKNV
FNVDCNKAGTNMLLVGVHGPRTPCEKVYVKHMGNRLYNVTYTVKDKDNYTIIVKWGDDSV
PGSPFKVAVP
NT seq
8133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctataatgcacattactatgaagacagccacccaccacagtactaccagggc
actgacaactctgaaggggacaaggaagacgagatgccggctacagagaaggaccttgcc
gaggatgcgccatggaagaaaatacaacagaacacttttacaaggtggtgcaatgagcac
ctcaagggcatcaacaagagcatcactgacttacagaaggatgttggcgacggtttaaag
ctgatcgggctcctggaagttctgagtcagaagaagatgtacagaaagcatcacaataga
cccaacttcagacagatgaaactggaaaatgtgtcggtggcccttgaattcttggacggg
gaacacatcaagttggtgtctattgactccaaggccatcgtggatgggaacctgaagttg
atcctgggtctgatctggactctgatcttgcactactccatctccatgcccatgtgggag
gacgaggatgatgaggaggccaaggaactgacccccaagcagaagctgcttggctggatc
cagaacaaggtgcctgagctgcccatcaacaacttccaccgtgactggagggacggcaag
gccctaggagctctggtggacaactgtgcccctggtctgtgccctgactggcaggcctgg
gaccctaaccagcctgtggagaatgccagagaggctatgcagcaggctgacgactggctg
ggcgttccccaggtgatcaaccctgaggagattgttgatccggaagtggatgaacagtcc
atgatgacttacctgtcccagttccccaagtctaaactgaggcctggcgctcccctcaaa
cctaaaggggttcagctgtaccccaaaaaagccaagtcttacggaccaggtattgaggca
aatggtaacatggttctgaagccagcagtattcacggtggaaactctagaggcaggtcag
gctgaggtgctggtgtatgtcattgatcctgagggacacactgaggaggctaaggtggtc
ttcaacaacgacaagaacaggacccacactgtcatttacatccccaaggttgagggcgcc
cacaaggtgaaagtgctatttgctgggcaggatgttgataagagcccctacacagtgaac
gtggccaaggcaataggtgatcccaacaaggtccaggccaaagggccagggctggaagct
accagcaacatggccaacaaacccacctacttagacatctacactgcaggtgctggtaac
ggtgatgtgagcgttgtcatcgtggaccctgaggggaagaaagacacggtgaaactgatc
ttggaaaacaagggggacagtgttttccgttgcacctaccggcccatgttggaaggcccc
cacaccatccatatcctgtttgccggtcaggagatccttaagagccccttcaaggttcaa
atcacagaggccatcaatgccgacacgtgtcgtgccacgggcagaggccttcagccaaaa
ggggtgggggtcaaggaggtggcagacttcaaggtcttcaccaagggagctggcaacgga
gagctcaaggtctcagtgactggaccatgtggagatgaggagccagtgaaagtaaaagat
attggtgatggtgtctatgaatgtgaatatcttcctaaccagactggtaaatacaccgtc
aacatcacctggggaggacagcccatcccacacagccccttcgatgtggaggtgagtgag
gtggcaggccctcagaaggtgagagcctggggtcctggtctgttgaccggccgggtgggc
aagtcggctgacttcgtggtggaggccatcggcacggaagtgggaactctgggcttcctt
atcgagggtccatcccaggctaagatagagtgtgatgataaaggtgacggctcctgcgat
gtccgctattggcccactaagccagattactatgctgtccatgtcatatgtgatgacgaa
gacatcaagggcagccccttcatggcccacatcctctctgcaaccaatgactgcttccct
gataaggtgaaagctttcggtccaggcctggagcccataggggtcatcgtaaacaaacca
gcagagttcaccatcgatgcccgcggggctggcaaaggccatctgaagatctacgccaag
gattcagagagcgtcaccatcgacattaagataactgataagggagacgggaccttcttg
tgtgcgtacgttcccatcaagcccatcaaacacaccatcatcatcacctggggagatgtc
aaagtgcccaacagccacttcagggtgattgttggagagggctgccacccagacaaggtc
aaggtgtatggtccaggagtggagaagacaggactcaaggcaaacgagcccaacttcttc
actgtggactgcgcagaggctggacaaggagacatcagtattgggatcaagtgtgctcca
ggagtggtgggtccagctgaggctgacatcaactttgacattatcaagaacgacgatgac
accttcactgtcaagtacaccccccccggtgcagggaaatacaccatcatggtgttgttc
gctgaacaggaaatccccattagtccatttagagtgaaggtgaatcgttcccatgatgct
ggcaatgtgagggctgagggtccaggactcaacaagacaggcgtggaggcgggcactccg
acccacttcaccatcttcacacagggagcaggcaaggccaagccaaaggtccagttccca
gcagcagaactgaagggagaggctgtcagggactttgagatcatagacaaccatgacaac
tcctacaccgttaagtacaccgctgttcatcagggtcagatgaccatctccgtcacccat
ggaggggaccccattcccaagagccccttcaatattactgtggctcttcctgtagatctg
ggaaaggtcaaggttgcaggactggacaccaaggtggaagttggcaaggatcaagagttc
tacatcaacacccagggagccggaggaaagggcgaggtggctgtcaagatgacctcaccc
tctggccgaccaatcctttacaagctggattcggaaacagccaatggagcccactcggtg
aagtacatccccccagaggaggggccttacaaggtggacatcagctatgattgcaacccc
gtccctggatcccccttcgctgtggagggagtgatgcctgctgacccatcaaaggtgcgt
gcatacggcccaggcctgaagggaggcattgtgggtaaaccagccccctttgccattgac
accaatggagcgggcctcggcaggctgggcctgactgtggaggggtcgtgcaaggctaag
atcgagtgccaggacaatggacacagtacctgctcggtgtcctacctgcctaccgaggct
ggagagtatgccatcaatatcctgtttggaaagcagcacatccctgggtctcctttcaag
gcagctgttaagccatgcctggaccccagccaggtcaccgccagtggtccaggcctagat
aaagccaaggcaggggaaccagcctactttacagtggactgcaccagtgccggagaggct
gagctcaccatcgagattgtctctgagtccggggctgagtccgaggtccacatccagaag
acagccgagggatccttctctgtcacctacatcccacctttccacggcacacacaccatc
accattaagtacgggggtcatgtggttcccaacttccctgcgctcatccgagtggagccg
gctgttgataccggcggagtgcaggtctatggaccaggagtgcagcccagaggtgtcatc
aaggaggttaccactcacttcattgtggatgcccgcaaaatgcccaagaccttcggtgac
cacttgaaagcatgcatcatcaacccttcaggcaccaacacagacacctacatcacaaac
aggggagacggaaccttcagagtggaatacaccgcctatgaggacggtatgcatgtgatt
gaggtactgtatgacgaggtggccatccctaagagtcccttcagggtgtcagtggtggag
ggatgtgaccccacccgggtcagggcctacgggccagggctcgagggaggactcatcaac
acacccaactgcttcaccgtcgagaccaggggtgctggtactggaggcctgggcctgacc
atagagggagcgtcagaggcaaaaatgacctgtaaagataacaaagatggcagctgcagc
gtagagtacgtacccttcacacctggagagtacgacgtcaatatcaacttcggaggacac
cccattccaggcagtccgttccgcgtgccagtgagggatgtggtggatcccagtaaggtg
aaatgttcaggcctaggtttgggtgacagagtcagagcccacctacctcagacctttact
gtggacactatacaggcaggacaggcaaatctggaggtcagtctcataggaccatcaggt
tcagagcctgttgctgtaaaaaataacagtgatggtacacacacagtcaactacactcca
gttcgtgatggcccttacactgtgtcagttaaatatggagaccaggaggttcctcgcagt
ccattcaaggtgagatctcagcctggtcatgatgccagtaaggtttgtgcaagcggtcca
ggtctggacaagtcaggtgtgcccgccagcctgccagtggagttcaccattgatgcccgc
gacgcaggagagggactgctcactgtacaaatactggaccaagaatgcaagccaaagaag
gctaccatctatgataacagagatgggacctacacagtgtcttacgtaccagactccacc
ggcccttacacaatcatgatcaagtatggaggcgatgagatcccctactctccctaccat
atcttagccctgcccactggagacgccagcaagtgtctgctcactgtgtctatcggagga
catgccctggcatcaggtctgactaagatgcaggtgcacgaggaggccatcatctctgtg
gacacaaaggctgctgggaagggcaaggtgacctgctcggtcatgaccccagagggggtg
gagctagacatggatgtgcaggagaaccgtgatggaaccttcgacatctactacactgct
ccagaaccaggaaaatacgtcatcaccatccgcttcggaggacagcacatacccaagagc
cccttccatgttacggcaacaaatgagcccattgtccttagtgacggcatggatcagttc
cgccctctcaacctggtcatcccgttcactgtacagcagggaccgatcacaggtgaggtg
cgtatgccctacggtaagactgcccatccctacataataaatgacattgatgggaccatc
acagttaaatccaaccctactgaaaacggtctgcacgagatggacatcaagtatgaagga
aatcacatcccaggaagccccctccagttctatgtggatgctatgaacagtggtctggtg
acagcatacggccctggtctctgtcaagggtccatcaacaaacctgtcactttcattgtg
gtcaccaagaacgctggagaaggtggtttatccctagcggtggagggtccttctaaggca
aagatcacctgtaaagacaataaggatggaacctgtactgtatcctacctgcccacctca
ccaggagactacaagatcattgtcaagtttgacaacaaacacatagccggcagccccttc
acagctaaaatcactggtgatgactctatcaggacatcccagctcaacgtggggacagca
gcagacttgtcactgaagatcacagagtctgacctgagtctgctgacggctaatatcaga
gctccatcaggcaacgaagagccgtgtttgctcaagagactgcccagcagacacataggt
atctccttcacccctaaggaggtgggagagcacgaggtgagcgtgaagaagaacggtaag
cacgtgaccaacagccctttcaagatccaggttggccagtcagatattggcgaggccagt
agggtcaaggcctttggtaaaggactggtggaggcacacaccttcaaaatggctgagttc
tttgtggacactagggatgcaggttatggtggtctggggttgtcgatcgagggtccgagt
aaagtggatattaactgtgaggttgtggaggatgggacgtgcagagtcagttactgcccc
acagagccaggcaaccacatcatcaacatcaagttttctgacaagcacatcccaggaagt
cctttcacagtgaaggtgacaggagaaggaaggatgaaggagagcatcaccaggaagaga
actgcccccgccatcgcttctattggcagcgcctgtggcctcaacctcaaaatccctgga
aactggttccagatggtttcagcccaggagaggatgacgcgcacattcacacgcagcagc
gacacgtacacacgcaaggagcgcacggagatcagcaagatgcggggcggcgagacgaag
agggaggtgagggttgaagagagcacccagacgggaggaacaggaggagccagtccattc
aaagatgtttttggagagttcctgggcagagagagtctggctagcttcgctgggataccc
gctacagtcacaccaggtgaaaccgctaccaagggtagtatgatggcccaggttaccagc
cctgggggtaaaacagaacaggcagagatcatagatggaggggacaacacctacagtgtc
cgcttcgtgccccaggagatgggggcccacacggtcaatgtgaagtacagcggtcagcat
gtccctggaagtcccttccagtttacagtgggacccctgggagaaggagggtcccacaag
gttcgggccggaggcactgggctggagagaggagtggcaggagcaccaactgagtttagt
atctggacgcgggaggccggtgcaggcggtctgtccatcgctgtagaggggcccagtaag
gctgagatctcctttgaagacaggaaggatggatcctgtagggtggtctacattgtacag
gatccaggtgactatgaagtgtcaatcaagttcaacaacgagcacatccccgacagcccc
tttgttgttcccatagcaacgctgtctgatgaggcatgccgactcactgtcaccagcctg
caggagaaggacctaaaggtgaaccaggaagcgtcgttcgctgtacagtgtaacggggca
aggggcgtggttgatgctaaggtccataccccctctggctcagcagaggagtgctacatc
acagacctggatagtgacaagaacgtcatccgcttcattccccgtgagaatggcgtgcac
tccatcgacgtcaagttcaatggcagccacatccctggaagtccgttcaacgtgagggtg
ggggaggccggacaggctggagacccaggcatggtgacagtgtatgggcctggactggat
ggaggatccacaggtgtagcctcagagtttgtagtgaacacctgtaacgcggggtcgggt
gccctgtccgtgaccatcgacggtccctctaaggtgaagatggactgttccgattgcctt
gatggctacaaggtcatctacacacccatggcccccggcaactatctcatcaccatcaaa
tatggaggacccaaccatatagtgggcagcccattcaaagccaaagtcacaggtacccgt
ctgtctggtggtcacagccttcacgagacgtcctcggtcctggtacagacgattactaag
acgtccaaggtagcaggagcgtacagtacctcgtcctcctcaaaactgacctctgacgcc
agcaaggtggtgtgtcgaggcggcgggctcaccaaggctctggtcggacagaagaatgta
ttcaatgtggactgcaacaaagcagggactaacatgttgcttgtgggagtgcacggcccc
aggacgccctgtgaaaaggtgtacgttaaacacatgggcaaccgcctgtacaacgtcacc
tacactgtcaaagacaaggacaactacaccattatcgtcaagtggggggatgacagtgtt
cctggcagccccttcaaagtagctgtgccctga
DBGET
integrated database retrieval system