Oncorhynchus keta (chum salmon): 118401817
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Entry
118401817 CDS
T09424
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118401817 (tcf3a)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
118401817 (tcf3a)
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GFIT
Motif
Pfam:
HLH
SR-25
Motif
Other DBs
NCBI-GeneID:
118401817
NCBI-ProteinID:
XP_035655321
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All DBs
Position
23:12854678..12900644
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AA seq
652 aa
AA seq
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MATVGTDKELSDLLDFSAMFAPPVLNGKNRPTTLASSQFGGTGMDERSGSTPWASGEQNS
PSFNQGRGYGEGTHYNEHECLASTPMFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRSTQESMDGQPKKIRKVPPGLPSSVYASASGEDYNRDA
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSAGPMGQPGYSAVLGNSPHLGQPAPFTAI
NPQDRLKRQPLPLSPQNYPLHGSEVNGSFHPGSAGYGVPNHTPPINGTDSIMANRGTAPP
SSGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWSRGSGQATPSPNFEGG
LQALQNKMEDRLEEAIHVLQRHAGGQGGPGGLTDMHSLLSAGIGGLAQAFNNAGLGLANR
LPNLMANHHEDSAGPPSSGPGLHGHHGPPSAQSGSQPEGFTSLSRSTHSSSGADIKREDK
EDDENSSVADKSEDEKKDSKARTRTRETFSFQTFSSSLSDTGADSSCSVASPSDDNLTAE
EKEKRERERRSANNVRERVRVRDINEAFRELGRMVQVHLRGDKAQTKLIILQQASQVIMG
LEKQVRERNLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVNHM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtggggacagacaaggagctcagcgacctgctggatttcagcgcgatgttt
gcacctccggtgttgaatgggaagaacaggcccaccactctagccagcagccagttcgga
ggcactggtatggatgagcgaagcggttctaccccctgggcatctggagaacagaacagc
ccttccttcaaccagggacggggttatggtgaaggaactcattacaatgagcacgaatgc
ctggcttccacccctatgttcggctcaggaattgtgggcaaagctgagcgaggaccttac
tcttcttttggagcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtccccctcgggtctgaagtcaggctcccagttctacccctcccagttcaatcct
cgcaggagatccacccaggagagcatggatggccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcagtgtatgcgtcagcctcaggagaggactataatcgagacgct
gcagggtatcctgcctccaagcctgggaacgtgggctaccccggctccttctatatgcaa
gaaggtctgcacccctcccctgacccgtggagttctgccgggccgatggggcagccgggc
tactctgctgtgctgggtaactcccctcacctgggccagcccgcccccttcacggccatc
aacccgcaggacagactgaagcgccagccgttgccactttcgccccagaactaccccctg
catggcagcgaggtgaacgggagctttcaccctgggtccgctggctacggagtccccaac
cacaccccccccatcaatggaacagacagcatcatggccaaccggggaacagctccacct
agctcaggagatgagatcggcaaagccctggcatcaatttatccttcggaccacaacagc
aacaccttcccttcatctccatctactccagtgggctctccccaggccatagcaggttct
gcctctcagtggtcccggggctcgggacaggccacaccctctccaaactttgagggagga
ctgcaggctctgcaaaacaaaatggaggaccgtctggaggaggcaatacacgttctgcag
cgccacgccgggggacaggggggcccaggggggctgactgacatgcacagcctcctcagc
gctgggataggaggtcttgcccaggccttcaacaacgccggcctgggactggccaacaga
ctgcccaaccttatggccaaccaccatgaggactctgctggtccgccctctagtggtcct
ggtctgcatggtcaccatggccctccctcagcccagtctggcagccagcctgagggcttc
accagcctctctcgctccacacactcgtccagtggcgccgacatcaaaagggaggacaag
gaggatgacgagaactcctccgtggctgataagtcagaggacgagaagaaagactcgaag
gctcgcacccgaacaagagagacgttctccttccagaccttctcttcctccctatcagac
acgggagcagacagcagctgcagcgtggcctcgcccagcgacgacaacctgactgcagag
gagaaggagaagcgtgagcgggagcgccgctcggccaacaacgtccgggagagggtgcgc
gtgcgcgacattaacgaggcgttcagggagctgggccggatggtgcaggtgcacctgcgc
ggcgacaaggcccagaccaaactcatcatcctgcagcaggcctcgcaggtcattatgggc
ctggagaagcaggtccgagagcgtaacctgaaccccaaggcagcgtgtctgaagcggagg
gaggaggagaaggtttcgggggtggacccccagatgcagatgggaggggggcaccccggg
ttaggcggcgatggacacaactctgtgaaccatatgtaa
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