Oncorhynchus keta (chum salmon): 118402441
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Entry
118402441 CDS
T09424
Name
(RefSeq) stromal cell-derived factor 1-like
KO
K10031
C-X-C motif chemokine 12
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04060
Cytokine-cytokine receptor interaction
oke04672
Intestinal immune network for IgA production
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118402441
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118402441
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118402441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oke04052
]
118402441
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118402441
Cytokines and neuropeptides [BR:
oke04052
]
Cytokines
Chemokines
118402441
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Chemokines
118402441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
118402441
NCBI-ProteinID:
XP_035656537
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All DBs
Position
2:complement(51802407..51842376)
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AA seq
98 aa
AA seq
DB search
MDLKYLAVMVVLAVATYAPFSQAKPISLVERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKTSKQTN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatacttggcggttatggttgtgctcgctgtggcgacatacgctcctttc
tcacaagctaaaccaatcagtctggtggagaggtgttggtgtcgttctacagttaacacc
gtcccccagcgtaacatccgagaactgaagttcctgcacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtttgtatcaatcccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagacatccaagcagaccaactag
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