Oncorhynchus keta (chum salmon): 127919499
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Entry
127919499 CDS
T09424
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03272
Virion - Hepatitis viruses
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127919499
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127919499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127919499
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127919499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF_3
EGF
hEGF
Gemini_mov
DUF1180
Motif
Other DBs
NCBI-GeneID:
127919499
NCBI-ProteinID:
XP_052359108
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MLPTRVGITGLTACCLVLLSHCFAPTDAAYTCGTSQFRCGNGKCITSRWVCDGGDDCGDG
TDELPAACEAKTCLPTEFSCGGPLNKCISGTWHCDGKADCDNGADEKGCAAKNCTDNEFR
CSNGQCIAVSFVCDKDNDCSDGSDETSCPTATCGPNAFQCNNTVCVPRLWACDGDADCAD
GSDEWPQNCGGRDTKPTTKPCGPHEFHCGSGECIHRSWSCDGGKDCLDNSDETNCSRPTC
QPDEFQCNDGSCIHGSRQCDRQFDCRDLSDEMDCKSVDACEGPNSFRCKSGECITVDKVC
NGKKDCRDMSDEPIRECGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLGKDNRKCEDI
DECADPDTCTQICVNILGSYKCECEEGYELDPKTKTCKAATGTVPYLLFTNRHEVRKMTL
DRREYVPLIPRLKNVVALDMDMPGHKIFWSDLYHRKIYSADMNLAGNSSHHNVVIDSQME
VPECLAVDWIHGNIYWTDSELQTISVATTDGTRRKTLISEGLEKPRSIVVDPANNFMYWT
DWGNEAKIEKSGLNGADRVALVTDNIMWPNGITLDMVNQRLYWVDSKMHTLSSIGVNGEG
RHTLIYNEDKLAHPLSLAVFQEKVFWTDMGDRAVMSANRLTGNDITVLAEDLLQPEDIIV
YHNLKQPIGKNWCTEKNFVNGGCEFLCLPAPQINQHSPKYTCACPDHMTLGLDMRKCVAA
PTTTAPPTTPKTAAPIPTRAPTKQPAGPTSTTTTTTTTTSSARRAQPQDPDRSSTTHSPQ
ETAVTGQSGYVAMPKVAEASHHTVLYIVLPIMMMCLVLFGAVLLWRHWRLKNTNTIHFDN
PVYQKTTEDELHICRNHSQDGYTYPQRQMVSLEEDLA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgactcgtgtgggaatcaccgggctgacagcatgttgcctggtgttgctctcc
cactgttttgctcctacagatgctgcgtatacatgtgggacaagtcagttcaggtgtggc
aacgggaaatgtatcaccagccggtgggtgtgtgacggaggtgatgactgtggtgacgga
actgacgagctgccagccgcctgtgaggctaagacctgcctgcccactgagttcagctgc
ggaggcccactgaacaagtgtatctctggaacgtggcactgtgatggcaaagctgactgt
gacaatggagctgatgagaagggctgtgccgcaaagaactgcaccgacaacgagttccgc
tgctccaacggtcagtgcatcgccgtctccttcgtgtgcgacaaggacaacgactgttcc
gatggttctgacgagacttcctgtcccaccgccacctgcggtcccaacgccttccagtgt
aacaacactgtgtgtgtcccgcgtctctgggcctgcgacggcgacgccgattgtgccgac
ggttcagacgagtggccccagaactgtggcgggagggacaccaaaccgacaacaaagccc
tgtgggccacatgaattccactgtgggagtggggagtgtatccataggagttggagctgt
gatggaggcaaggactgtctggataattcagatgaaaccaactgcagtcggcccacttgc
cagccagatgagtttcagtgtaatgatggctcctgtatccatggtagccgtcagtgtgac
cgccagtttgactgcagggatctgagtgatgagatggactgcaagagcgtggatgcgtgt
gagggcccgaatagcttcaggtgtaagagtggggagtgcatcaccgtggacaaggtgtgc
aacgggaagaaagactgccgagacatgtccgacgaacctatcagggagtgtggcaacaac
gagtgtttgaccaataacggcggttgctctcacacctgtaccgacctgaagattggcttc
aattgctcctgtcctgctgggtacagtctggggaaggacaacaggaaatgtgaagacatt
gatgagtgtgctgacccagacacctgtacccagatctgtgtgaacatcctgggaagttac
aagtgtgagtgtgaggagggctatgaactggaccccaagaccaagacctgcaaggctgcc
acaggtactgtcccctacctgttgttcaccaaccgccacgaggtgaggaagatgactctg
gaccgtagagagtatgtccctctcatccccagactgaagaacgtggtggccctggacatg
gacatgcctggacacaagatcttctggtctgacctgtaccacaggaagatctacagcgcc
gacatgaacttggcagggaactcctcccaccacaacgtggtgattgacagccagatggag
gtgccggagtgcctggccgtcgactggattcacggtaacatctattggacggacagtgag
ctccagaccatctccgtggcaaccacggacggaacacggcgaaagacactgatcagcgaa
ggactggagaaaccaagaagcatcgtggtggatccagccaataacttcatgtactggact
gactggggcaacgaggccaagatcgagaagagtgggctgaacggagccgaccgcgtcgcc
ttggtaacggacaacatcatgtggcccaacggcatcactcttgacatggttaaccagcgt
ctgtactgggtggactctaagatgcacaccctctccagcatcggagtaaacggagaagga
cgacacacactcatctacaacgaggacaagctggctcaccccctctctctcgccgtcttc
caggagaaagtattctggaccgacatgggcgacagagcggtcatgagcgccaaccgcctg
acaggaaatgacatcactgtactggcggaggacctgttgcagccagaggacatcattgta
taccacaacctcaagcagcccatcggaaagaactggtgcacagagaaaaactttgtgaat
ggaggttgtgagttcctatgtctacctgctccccagatcaaccaacactcccccaaatac
acctgtgcctgtcctgatcacatgaccctcggcctggacatgaggaagtgtgtggcagct
ccaacaactaccgctccccccaccactcccaaaactgcagctcccatccctaccagggcc
ccaaccaaacagccagctggccccacttccaccacaactacaactacaacaactacctcc
tccgcccgccgggcccagcctcaggaccctgataggtcctcgaccactcacagtccacag
gaaactgcggtcacaggtcaaagtggctatgttgccatgcccaaagtagctgaggcatca
caccatactgtgctctacattgtcttacctatcatgatgatgtgcctggtgctgtttggt
gcagtgttgctatggagacactggaggctgaagaacaccaacaccatccactttgacaac
cccgtgtaccagaagaccacagaggacgagttgcacatctgtagaaaccacagccaggac
ggatacacctacccacagagacagatggtgagcctggaagaagacctggcatga
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integrated database retrieval system
