Oncorhynchus keta (chum salmon): 127920114
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Entry
127920114 CDS
T09424
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00514
Other types of O-glycan biosynthesis
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127920114
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127920114
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
127920114
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
127920114
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
127920114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Glyco_tranf_2_4
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127920114
NCBI-ProteinID:
XP_052359870
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MSEGVWRKRVPSTAGGASFTCLVMMFLLVAVIKHRGTLVEEGSNGREFGTRSLQTLNSMN
NNNQAPAEDRVGEKCQATQVKGFSAYFSELSRGKRAVEHRAVKDPTPVEELSPADVFIAV
KTTKKYHHTRLDLLLDTWISTNMLQTYVFTDGEDDRLRKRMGSHMINTNCSAAHSRQALS
CKMAVEYDTFISSGKKWFCHVDDDNYVNIRPLVKLLSHYSHAHDVYIGRPSLDRPLEATE
RFGDAHTRPVRFWFATGGAGFCVSRGLALKMSPWASGGNFMTTADRIHLPDDCTVGYIIE
ALLGVGLIRSPLFHSHLENLQLVSPTQIHHQVTLSYGTVDSKRNIINLRGALSLDEDPTR
FRSVHCVLYPDTPWCSALTWY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggtgtctggaggaaacgcgtgccctccacggctggaggagcctcgttcacc
tgcctcgtgatgatgtttcttctcgtcgccgttatcaaacaccgggggactctcgtggag
gaaggttccaacgggagagagttcgggactcgctccctgcaaactttaaacagcatgaat
aataataaccaagctccagccgaggatcgggtcggggagaaatgtcaggcgacccaggtc
aagggtttctcggcgtacttcagtgagttgagccgggggaagcgggcggtggagcacaga
gcggtgaaggatcctacaccggtggaggagctcagtccggcggatgtgttcatagcggtg
aaaaccaccaagaaatatcaccacaccaggctggatctactgctggacacatggatctct
acaaacatgctacagacgtatgtattcaccgacggagaggatgacaggctgaggaagagg
atggggagtcacatgatcaatacgaactgttcagcggcccacagtcgccaggctctgtcc
tgtaaaatggccgtcgaatacgacactttcatcagctctggaaagaaatggttctgccat
gtggatgatgataactacgtgaacatacgtccccttgtgaagctcctgtctcactacagc
cacgcccacgacgtctacattggccggccgagcctcgaccgaccgctagaagccaccgag
aggtttggcgacgcccacacgcgtccagtgcgtttctggtttgccacaggaggagcaggg
ttctgtgttagtcgaggtctcgccctcaagatgagcccctgggccagtggaggtaatttc
atgacaacagctgatcgtattcatctccctgacgactgtacggttggttacatcatcgag
gcgttgctaggggtgggtcttatccgctccccactgttccactctcacctggagaacctt
cagctggtgtcaccgacacagatacaccaccaggtgactctgagttatggaacggttgac
agtaagagaaacataatcaatttaagaggagcgctctcattggacgaagaccctaccagg
ttcaggtctgtccattgtgtcttatacccagacactccgtggtgttcagccctgacctgg
tactga
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