Oncorhynchus keta (chum salmon): 127920654
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Entry
127920654 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase-like
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00600
Sphingolipid metabolism
oke01100
Metabolic pathways
oke04142
Lysosome
oke04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127920654
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127920654
09143 Cell growth and death
04217 Necroptosis
127920654
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
127920654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
127920654
NCBI-ProteinID:
XP_052360620
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MRFAPIPCAVGLLCCVLVLCSVPLGTSFPVQDEGKPGITFLEEVGRLRVGFNWRNLTCPV
CKVLFTILDVALLSDVNEERVARAVGEACIRLHLAEERVCRQITELFRDDFIRALQQSLL
WPSEACALLVGRSCGRFDIYAPWNVTLPRIPKPPVTPPRTPKPGAPQSRVLFLTDIHWDQ
EYAVGSSADCKDPLCCRNESGSPSWNQRAAGFWGSYSKCDLPLRTVENMLENAARTGPWD
WVYWTGDIPAHNIWSQTRKQQLSELTVITRLIHSHLGNLKVYPAIGNHESTPVNSFPPPF
VHGNRSSHWLYDTMAEEWAPWLPEQALKTLRHGGFYTVEVXPGLRVVSLNMNFCARENYW
LMVNSTDPANQLQWLIHILQASEEKGERVHIIGHIPPGLCLSSWSWNYYHIINRYEGTIT
GQFFGHTHXDEFQMFYDEATMTRAVGVAFIAPSITTYVNLNPGYRVYLVDGNYKGSSRFV
LDHETYILNLTEANRQPEGGFSSLLPTTSQHAIFHPDPNPKWTLLYRASEAYGVSSLFPS
DWDGLIRTFLQDDRVFQRFWYFRHKGHVSEPCIDACKTTVICFLRSGRYDELEQCDLLEF
GGDMVSAVRKTLC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgcacctatcccctgcgcggtggggttgctgtgttgtgttctggtgttgtgc
tcggtaccgttggggacctcgttccccgtgcaggacgaggggaaaccgggcataacgttt
ctggaagaggtcgggcgtctccgggtcgggttcaactggcggaacctgacctgtccggtg
tgcaaagtcctcttcaccatcctggatgtcgctctgctgagtgacgttaatgaggaacgt
gttgcgcgggctgtgggtgaggcctgtatccgtctccacctggctgaagagcgggtctgt
cgtcaaatcacagagctgttcagagatgacttcatcagggccttgcaacagtctctgttg
tggccgtcggaggcctgtgctctgctggttgggaggtcatgcggacgcttcgatatctat
gctccctggaacgtaaccctaccccggatccccaaacccccagtcaccccgccccgcacc
cccaagcctggagcaccacagagcagggtcctcttcctcacagacatacactgggatcag
gagtatgcagtgggcagctctgctgactgtaaggacccgctgtgctgtcgtaatgagtct
ggatctcccagctggaatcagagagcggctgggttctggggctcctacagtaaatgtgac
ctgcccctgagaactgtggagaacatgttggagaacgcagcgcgaactggaccgtgggac
tgggtctactggacaggagatatacctgctcataacatctggtctcaaaccaggaagcag
caactgtctgaactcaccgtaatcaccagactgatacacagtcacctaggtaacttgaag
gtgtacccggcgatcggtaaccatgagagcaccccggtcaacagtttccccccgccgttc
gtccatggcaaccggtcgtcacactggctctatgacaccatggccgaggagtgggcgcct
tggttaccagaacaggccctgaagactcttaggcatggtgggttctacacggtagaggtc
nagccaggtcttcgagtggtgtctctgaacatgaacttctgtgccagggaaaattactgg
ctgatggtcaactctactgaccctgctaaccagctccagtggctgatccacatactacag
gccagtgaagagaagggagagagggtccacatcatcggtcacatcccccctggtctctgt
ttgagcagctggagttggaactactaccacatcatcaaccggtatgagggtacgatcaca
ggtcagttcttcggccacacacatnnggatgagtttcagatgttttatgatgaggcgacg
atgactagggctgtgggcgtggccttcatcgctccctccatcaccacctatgtcaacctc
aacccaggttaccgggtctacctggtcgacggtaactacaagggcagttcccggtttgtt
ctggaccatgagacgtatatcttaaaccttacagaggctaaccgacagcctgaagggggg
ttctcctccctgctccccaccacctcacaacacgccatcttccaccctgacccaaacccc
aaatggaccctcctctaccgtgcttctgaagcctacggcgtctcatccctgttcccgtcg
gactgggacgggctaatcaggaccttcctccaggacgaccgtgtgtttcagcggttctgg
tacttcagacataaaggccatgtgtcagagccctgtatagacgcctgtaagacaaccgtt
atctgtttcctacgttcaggcagatatgacgagctggagcagtgtgacctgttggagttc
gggggagatatggtttcagctgttaggaagacactgtgttga
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