Oncorhynchus keta (chum salmon): 127922739
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Entry
127922739 CDS
T09424
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
oke04145
Phagosome
oke04210
Apoptosis
oke04510
Focal adhesion
oke04520
Adherens junction
oke04530
Tight junction
oke04810
Regulation of actin cytoskeleton
oke04814
Motor proteins
oke04820
Cytoskeleton in muscle cells
oke05100
Bacterial invasion of epithelial cells
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127922739
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127922739
09143 Cell growth and death
04210 Apoptosis
127922739
09144 Cellular community - eukaryotes
04510 Focal adhesion
127922739
04520 Adherens junction
127922739
04530 Tight junction
127922739
09142 Cell motility
04814 Motor proteins
127922739
04820 Cytoskeleton in muscle cells
127922739
04810 Regulation of actin cytoskeleton
127922739
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127922739
05100 Bacterial invasion of epithelial cells
127922739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
127922739
03019 Messenger RNA biogenesis [BR:
oke03019
]
127922739
03036 Chromosome and associated proteins [BR:
oke03036
]
127922739
03029 Mitochondrial biogenesis [BR:
oke03029
]
127922739
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
127922739
04147 Exosome [BR:
oke04147
]
127922739
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127922739
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
127922739
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
127922739
NuA4 complex
127922739
Chromatin remodeling factors
BAF complex
127922739
PBAF complex
127922739
GBAF(ncBAF) complex
127922739
SWR1 complex
127922739
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
127922739
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
127922739
Exosome [BR:
oke04147
]
Exosomal proteins
Proteins found in most exosomes
127922739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
127922739
NCBI-ProteinID:
XP_052362568
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagatgacgcgcctcgggctgtcttcccctccatcgtcgggcgtcccaggcat
cagggagtgatggttgggatgggccagaaagacagctacgtgggagacgaggctcagagc
aagaggggtatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctccggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtgcccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcttcctcttcctccctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagcggttccgctgcccggaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccacctacaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccccggcatcgctgaccggatgcagaaggagatcacctctctg
gccccttccaccatgaagatcaagatcatcgcccccccagagcgtaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtctggtccctccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system