KEGG   Oncorhynchus keta (chum salmon): 127922739
Entry
127922739         CDS       T09424                                 
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03082  ATP-dependent chromatin remodeling
oke04145  Phagosome
oke04210  Apoptosis
oke04510  Focal adhesion
oke04520  Adherens junction
oke04530  Tight junction
oke04810  Regulation of actin cytoskeleton
oke04814  Motor proteins
oke04820  Cytoskeleton in muscle cells
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127922739
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127922739
  09143 Cell growth and death
   04210 Apoptosis
    127922739
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127922739
   04520 Adherens junction
    127922739
   04530 Tight junction
    127922739
  09142 Cell motility
   04814 Motor proteins
    127922739
   04820 Cytoskeleton in muscle cells
    127922739
   04810 Regulation of actin cytoskeleton
    127922739
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127922739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oke03021]
    127922739
   03019 Messenger RNA biogenesis [BR:oke03019]
    127922739
   03036 Chromosome and associated proteins [BR:oke03036]
    127922739
   03029 Mitochondrial biogenesis [BR:oke03029]
    127922739
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    127922739
   04147 Exosome [BR:oke04147]
    127922739
Transcription machinery [BR:oke03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127922739
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     127922739
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     127922739
    NuA4 complex
     127922739
  Chromatin remodeling factors
   BAF complex
    127922739
   PBAF complex
    127922739
   GBAF(ncBAF) complex
    127922739
   SWR1 complex
    127922739
Mitochondrial biogenesis [BR:oke03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    127922739
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     127922739
Exosome [BR:oke04147]
 Exosomal proteins
  Proteins found in most exosomes
   127922739
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 127922739
NCBI-ProteinID: XP_052362568
EnsemblRapid: ENSOKEG00005018560
LinkDB
Position
Unknown
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagatgacgcgcctcgggctgtcttcccctccatcgtcgggcgtcccaggcat
cagggagtgatggttgggatgggccagaaagacagctacgtgggagacgaggctcagagc
aagaggggtatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctccggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtgcccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcttcctcttcctccctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagcggttccgctgcccggaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccacctacaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccccggcatcgctgaccggatgcagaaggagatcacctctctg
gccccttccaccatgaagatcaagatcatcgcccccccagagcgtaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtctggtccctccatcgtccaccgtaaatgcttctaa

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