Oncorhynchus keta (chum salmon): 127928281
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Entry
127928281 CDS
T09424
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127928281 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127928281 (smcr8b)
Membrane trafficking [BR:
oke04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127928281 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127928281
NCBI-ProteinID:
XP_052371400
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MTTGTHDPQSLFVYTRSILQAALQRISNEGAEIREEAELQKTANELASVDRSIVDHRSLL
HQVTSYPNRKLKDPGFLPYDPSLIPETLPLTPDPSSPSYTPQLVSGASLGGGGWSARRFD
RRLKPLEELSDCYFLSLTLEQLGNAERRLRGDQSVLHNRRITHRLSRTLSHTQFLFQLWD
QEEEEDLEEDGAGLEGGSGVMSHPVAGAGPPSLESFFSCVEEVSIKLETGSGGAEPTLDP
EGEGVTAETRPGSVSSGDSIEVLGTERSYRTQGLTHVELRELSGGLGQGEGCDVVRSCAP
AEVWMRRDVRSLARRANSEDSIEIISTSDSIFPDDLIFNAITEEEPEEHGIMGSVIQEEE
EEEEEAAGEDAPIQQHSTLGIVVHEEEEQTLHQRILGNIVQTEGKEELEDTPTRLHRTLG
IEVRELDEEKPERWDTPAPLSEPQRTLVHQVSVEGSSQQYEDHHANGEVRGQAGSDSRRV
VVPDLQVNFSIPLRLDVRGRGSGGQRLLGDTPYRLSVDEASDCMSNISTSPSSSLPPTHL
HGNHSAGNPRRHQRQRRKAGPGALRFLRQNSFSQSAVFCLLSGRPLVVIGGEEGSVRRTV
AALSLYLPSPGRYGDAVQPYLATPLQLTDLLTWRLIGIHRTSPTAPSMLHSLARYGRYLA
VLDLDQRTLRSPAYHGHLIGRLANPHTLIGRGSTYLLHVESCLAELTAKAFLFSCSPDLS
TLTSGRAQSSPGGQAPPICHSHSDLQLPSLPGILTSR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaggtacacacgatccacagagtttgtttgtgtacacacgatccatccttcaa
gcagcgcttcaaaggatatccaatgagggtgcggagatcagggaggaggcggagctgcag
aagacggccaacgagcttgctagcgtggatcgttccatcgtggaccacagatccctcctc
caccaggtcacttcctatcccaacaggaagttaaaagacccaggctttctgccctacgac
ccctccctgattccagagaccctccccttgactcctgatccctcctccccctcatacacc
ccccagctggtttccggggcgtcgctagggggcgggggctggtcagcgaggcggttcgac
cgccgtctgaagccgttggaggagctgagcgactgctacttcctgtctctgacgctagaa
cagctgggcaacgcagaacgccgtctccgtggagaccagagtgttctacacaaccgtcgc
atcacacacaggctctctaggacgctttcacacacacagttcctgttccagctctgggac
caggaggaggaggaggacctggaggaggatggggcggggctagagggaggaagcggcgtg
atgtcacatcctgtggcaggggcgggtccaccgagcctggagtcgttcttctcctgcgtg
gaggaggtgtcaatcaaactggagacaggaagtggaggggcggagccgacacttgatcct
gagggagaaggagtaaccgcggagacgagaccaggcagcgtgagcagcggagacagcatt
gaggttctggggacggagcgctcgtatagaacacagggactaacccacgtggaactcaga
gagttgtctggtgggttgggtcaaggtgaaggctgtgatgtggtgcggagttgtgcccct
gcggaggtgtggatgagacgtgacgtgcggtccctggcacggagggcgaacagcgaggac
agtattgagatcatcagcacctcagactccatcttccccgacgacctcatcttcaacgcc
atcacagaggaggagcctgaggagcatggaatcatgggtagtgtaatccaggaagaggag
gaggaggaggaggaggcagcaggtgaggacgcgcccattcagcagcacagcaccctgggt
attgtagttcacgaggaggaggagcaaactctgcaccaaagaatcctgggtaatatagtc
cagacggagggaaaggaggagctcgaggacactcccactcggctgcaccgcaccctgggt
attgaagtccgggaattggatgaggagaagccagagagatgggacactccggcccccttg
tctgagccccagagaactctggtccaccaggtgtcagtagagggctcctcccagcagtac
gaggatcatcatgccaacggcgaggtcagaggtcaggctgggagtgacagcaggcgggtg
gtggtgcctgacctccaggtgaacttttctatccccttgaggttagatgttagaggtcgg
gggtcaggggggcagcggttgctaggcgacaccccttacaggctgagtgtagacgaggca
tcggactgtatgagcaacatcagcacctctccatcttcctctctgccccccacacatctc
catggcaaccacagcgctggtaatccgcgacgacatcagcgccagaggaggaaggcgggt
cctggagccctcaggttcctgcggcagaattccttctcccagagtgccgtgttctgcctg
ctaagtggacggccgctggtggtgattggtggagaggagggttccgtgaggaggacggtc
gctgccctctcgctctacctgccttcacctggtcgctatggagatgctgtgcaaccttac
ttggccacgcctcttcagctgacagacctgctcacctggagactcatcggaatccacagg
acgtctcctacagctcccagcatgcttcactctctggctcgttacggacggtacctggcc
gtgctggacctggaccagcgtacactgagaagccccgcctaccacggacacctcattggc
cggctggccaacccccacactctgataggtcgtggcagcacctaccttctccacgtggag
agctgcctcgctgagctgaccgctaaggccttcctgttctcctgttctcctgacctttca
actctaacatcgggtcgagctcagagttcacctgggggtcaggcaccacccatctgccac
agccactctgacctccagcttcccagcctcccggggatcttgacttcacgctga
DBGET
integrated database retrieval system
