KEGG   Oncorhynchus keta (chum salmon): 127930173
Entry
127930173         CDS       T09424                                 
Name
(RefSeq) actin, non-muscle 6.2
  KO
K05692  actin beta/gamma 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03082  ATP-dependent chromatin remodeling
oke04145  Phagosome
oke04210  Apoptosis
oke04510  Focal adhesion
oke04520  Adherens junction
oke04530  Tight junction
oke04810  Regulation of actin cytoskeleton
oke04814  Motor proteins
oke04820  Cytoskeleton in muscle cells
oke05100  Bacterial invasion of epithelial cells
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127930173
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127930173
  09143 Cell growth and death
   04210 Apoptosis
    127930173
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127930173
   04520 Adherens junction
    127930173
   04530 Tight junction
    127930173
  09142 Cell motility
   04814 Motor proteins
    127930173
   04820 Cytoskeleton in muscle cells
    127930173
   04810 Regulation of actin cytoskeleton
    127930173
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127930173
   05100 Bacterial invasion of epithelial cells
    127930173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oke03021]
    127930173
   03019 Messenger RNA biogenesis [BR:oke03019]
    127930173
   03036 Chromosome and associated proteins [BR:oke03036]
    127930173
   03029 Mitochondrial biogenesis [BR:oke03029]
    127930173
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    127930173
   04147 Exosome [BR:oke04147]
    127930173
Transcription machinery [BR:oke03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127930173
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     127930173
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     127930173
    NuA4 complex
     127930173
  Chromatin remodeling factors
   BAF complex
    127930173
   PBAF complex
    127930173
   GBAF(ncBAF) complex
    127930173
   SWR1 complex
    127930173
Mitochondrial biogenesis [BR:oke03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    127930173
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     127930173
Exosome [BR:oke04147]
 Exosomal proteins
  Proteins found in most exosomes
   127930173
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 127930173
NCBI-ProteinID: XP_052375611
LinkDB
Position
5:33181412..33184668
AA seq 376 aa
MAEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMKTSASSSSLEKS
YELPDGQVITIGNERFRCPETMFQPSFIGMESTGVHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEISGLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYEESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggctgaagatgaaattgctgcactggtggttgacaatggttcaggcatgtgcaaggct
ggttttgcaggggatgatgctccccgtgctgtcttcccctccattgttggaagacccaga
catcagggtgtgatggtgggcatgggacagaaggacagctacgtgggagatgaggcccag
agcaagaggggcatcctgactctgaagtaccccatcgagcacggcattgttaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgagctgcgtgtggcccctgaa
gagcatcctgtcctgctcacagaggccccactcaaccccaaagccaacagggagaagatg
acccagatcatgtttgagaccttcaacagcccagccatgtatgtaggtatccaggccgtg
ctttctttgtacgcatctggtcgcaccacaggaatcgtgatggattccggggatggcgtt
agccacacggtgcccatctacgagggctacgctcttccccacgccatcctgcgtctggac
ctggccggacgtgacctcacggactacctgatgaagatcctgactgagcgtggctacagc
ttcaccaccacggccgagagggagattgtgcgcgacatcaaggagaagctggcctacgtg
gcgctggactttgagcaggagatgaagacctctgcctccagttcctctctggagaagagc
tacgagctgcctgatggacaggtcatcactatcggcaacgagcgcttccggtgccctgag
accatgttccagccgtccttcattggaatggaaagtactggagtgcatgagaccacctac
aactctatcatgaagtgtgatgtggacatcaggaaagacctgtatgccaacactgttctc
tcaggtggaaccaccatgttccctggcatcgctgatagaatgcagaaggagatcagtggc
ttggcacctcctactatgaagattaagatcatcgcccctccagagcgtaaatactctgtg
tggattggcggttccatcctggcctctctctccaccttccaacagatgtggatttccaag
caggaatacgaggaatccggcccgtctatcgtccaccgcaaatgtttctaa

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