Oncorhynchus keta (chum salmon): 127930173
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Entry
127930173 CDS
T09424
Name
(RefSeq) actin, non-muscle 6.2
KO
K05692
actin beta/gamma 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
oke04145
Phagosome
oke04210
Apoptosis
oke04510
Focal adhesion
oke04520
Adherens junction
oke04530
Tight junction
oke04810
Regulation of actin cytoskeleton
oke04814
Motor proteins
oke04820
Cytoskeleton in muscle cells
oke05100
Bacterial invasion of epithelial cells
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127930173
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127930173
09143 Cell growth and death
04210 Apoptosis
127930173
09144 Cellular community - eukaryotes
04510 Focal adhesion
127930173
04520 Adherens junction
127930173
04530 Tight junction
127930173
09142 Cell motility
04814 Motor proteins
127930173
04820 Cytoskeleton in muscle cells
127930173
04810 Regulation of actin cytoskeleton
127930173
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127930173
05100 Bacterial invasion of epithelial cells
127930173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
127930173
03019 Messenger RNA biogenesis [BR:
oke03019
]
127930173
03036 Chromosome and associated proteins [BR:
oke03036
]
127930173
03029 Mitochondrial biogenesis [BR:
oke03029
]
127930173
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
127930173
04147 Exosome [BR:
oke04147
]
127930173
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127930173
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
127930173
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
127930173
NuA4 complex
127930173
Chromatin remodeling factors
BAF complex
127930173
PBAF complex
127930173
GBAF(ncBAF) complex
127930173
SWR1 complex
127930173
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
127930173
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
127930173
Exosome [BR:
oke04147
]
Exosomal proteins
Proteins found in most exosomes
127930173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
127930173
NCBI-ProteinID:
XP_052375611
LinkDB
All DBs
Position
5:33181412..33184668
Genome browser
AA seq
376 aa
AA seq
DB search
MAEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMKTSASSSSLEKS
YELPDGQVITIGNERFRCPETMFQPSFIGMESTGVHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEISGLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYEESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatgaaattgctgcactggtggttgacaatggttcaggcatgtgcaaggct
ggttttgcaggggatgatgctccccgtgctgtcttcccctccattgttggaagacccaga
catcagggtgtgatggtgggcatgggacagaaggacagctacgtgggagatgaggcccag
agcaagaggggcatcctgactctgaagtaccccatcgagcacggcattgttaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgagctgcgtgtggcccctgaa
gagcatcctgtcctgctcacagaggccccactcaaccccaaagccaacagggagaagatg
acccagatcatgtttgagaccttcaacagcccagccatgtatgtaggtatccaggccgtg
ctttctttgtacgcatctggtcgcaccacaggaatcgtgatggattccggggatggcgtt
agccacacggtgcccatctacgagggctacgctcttccccacgccatcctgcgtctggac
ctggccggacgtgacctcacggactacctgatgaagatcctgactgagcgtggctacagc
ttcaccaccacggccgagagggagattgtgcgcgacatcaaggagaagctggcctacgtg
gcgctggactttgagcaggagatgaagacctctgcctccagttcctctctggagaagagc
tacgagctgcctgatggacaggtcatcactatcggcaacgagcgcttccggtgccctgag
accatgttccagccgtccttcattggaatggaaagtactggagtgcatgagaccacctac
aactctatcatgaagtgtgatgtggacatcaggaaagacctgtatgccaacactgttctc
tcaggtggaaccaccatgttccctggcatcgctgatagaatgcagaaggagatcagtggc
ttggcacctcctactatgaagattaagatcatcgcccctccagagcgtaaatactctgtg
tggattggcggttccatcctggcctctctctccaccttccaacagatgtggatttccaag
caggaatacgaggaatccggcccgtctatcgtccaccgcaaatgtttctaa
DBGET
integrated database retrieval system