Oncorhynchus kisutch (coho salmon): 109864917
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Entry
109864917 CDS
T09179
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
oki04110
Cell cycle
oki04114
Oocyte meiosis
oki04120
Ubiquitin mediated proteolysis
oki04141
Protein processing in endoplasmic reticulum
oki04310
Wnt signaling pathway
oki04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109864917
04120 Ubiquitin mediated proteolysis
109864917
09124 Replication and repair
03420 Nucleotide excision repair
109864917
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109864917
04350 TGF-beta signaling pathway
109864917
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109864917
04114 Oocyte meiosis
109864917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109864917
03400 DNA repair and recombination proteins [BR:
oki03400
]
109864917
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109864917
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109864917
Multi subunit type E3
SCF complex
Ring finger protein
109864917
Cul2 complex
109864917
Cul3 complex
109864917
Cul4 complex
109864917
Cul7 complex
109864917
Cul8 complex
109864917
Cul9 complex
109864917
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109864917
TCR (transcription coupled repair) factors
Cul4-CSA complex
109864917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING-like
DUF6811
FANCL_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109864917
NCBI-ProteinID:
XP_020308585
Ensembl:
ENSOKIG00005009382
LinkDB
All DBs
Position
LG19:42506386..42506778
Genome browser
AA seq
108 aa
AA seq
DB search
MDRMAAVMDVDTPSTMNSRASKKRFEVKKWNEVALWARDIVVDNCAICSNHTMYLCIEYQ
ASATSEESTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatggcggcagtaatggatgttgataccccaagcaccatgaatagtagagca
agcaagaaacgttttgaagtgaagaagtggaatgaagtggcactttgggcccgggacatt
gtggtggacaactgtgccatctgtagcaatcacacgatgtatctatgcatagagtaccag
gcctctgccacgtcagaggagtccaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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