KEGG   Oncorhynchus kisutch (coho salmon): 109864917
Entry
109864917         CDS       T09179                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03420  Nucleotide excision repair
oki04110  Cell cycle
oki04114  Oocyte meiosis
oki04120  Ubiquitin mediated proteolysis
oki04141  Protein processing in endoplasmic reticulum
oki04310  Wnt signaling pathway
oki04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109864917
   04120 Ubiquitin mediated proteolysis
    109864917
  09124 Replication and repair
   03420 Nucleotide excision repair
    109864917
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109864917
   04350 TGF-beta signaling pathway
    109864917
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109864917
   04114 Oocyte meiosis
    109864917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109864917
   03400 DNA repair and recombination proteins [BR:oki03400]
    109864917
Enzymes [BR:oki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109864917
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109864917
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109864917
   Cul2 complex
     109864917
   Cul3 complex
     109864917
   Cul4 complex
     109864917
   Cul7 complex
     109864917
   Cul8 complex
     109864917
   Cul9 complex
     109864917
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109864917
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109864917
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-RING_UBOX zf-RING-like DUF6811 FANCL_C zf-RING_5
Other DBs
NCBI-GeneID: 109864917
NCBI-ProteinID: XP_020308585
Ensembl: ENSOKIG00005009382
LinkDB
Position
LG19:42506386..42506778
AA seq 108 aa
MDRMAAVMDVDTPSTMNSRASKKRFEVKKWNEVALWARDIVVDNCAICSNHTMYLCIEYQ
ASATSEESTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggatagaatggcggcagtaatggatgttgataccccaagcaccatgaatagtagagca
agcaagaaacgttttgaagtgaagaagtggaatgaagtggcactttgggcccgggacatt
gtggtggacaactgtgccatctgtagcaatcacacgatgtatctatgcatagagtaccag
gcctctgccacgtcagaggagtccaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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