Oncorhynchus kisutch (coho salmon): 109865546
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Entry
109865546 CDS
T09179
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109865546
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109865546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
ATP-synt_B
IQCJ-SCHIP1
GPHH
Motif
Other DBs
NCBI-GeneID:
109865546
NCBI-ProteinID:
XP_031655356
Ensembl:
ENSOKIG00005014952
LinkDB
All DBs
Position
LG20:complement(25892607..25935021)
Genome browser
AA seq
1904 aa
AA seq
DB search
MAPLLPPTGADAFRRFTPESLAEIERLMEEKRIAAEVEGYVGEGPSEPSKDLEAGKSLPM
IFGDAPTEMLNTPLEDIDPFYKAQKTFIVITKGNTIFRFNAESACYILSPFNHLRRGAIK
ILIHSFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLR
DPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKM
VDVMILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNFTSSLDGTMGFGETS
NSTVPVDFKEYISNIENHYYLEGSLDALLCGNSSDAGKCPEGFTCIKAGRNPNYGYTSYD
SFGWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAY
DEQNEATLKEAQDKEEEFQRLLEQYRIQAQEQADAAAGSQATLTSRKELSHHSGSYGGSA
DDEQSLGDDVIKDCNGRIVPRLAIVPVSSESESVPEDELKEDSMFHLEQPGLKNRSASAV
SVLTTVMEELEDAQKPCPPGWYKFADIFLKWDCCMPWVWLKKWLLFIVMDPFVDLGITIC
IVLNTLFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNIFDS
IIVTFSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWIETMW
DCMEVAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGR
INWGIDWVKASVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDTCQDSKMADGM
TNCVDGLQADGEMSLNVPIAQGETDFENDDDYSGSFTSDEENGQGDHLKLLGAVGDESSV
CSTVDYVPEPEPVEEEEEEEPEPEEPEACFTDGCIARWPCLTFDVSQGRGKKWWNLRRTC
FTIVEHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEMLLKW
VAYGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPITEVN
NRSDCLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEEQP
SYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKKYHEAMK
KLGSKKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQSAEKENV
LYKINLAFIVVFTGECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIEKYFVSP
TLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF
AYVKKQAGIDDIFNFQTFGSSIICLFEITTSAGWDSLLLPILNSGPPDCDPDIENPGSDV
RGNCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFVMFDETW
EKFDLEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLDILLAVT
QEVLGEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAYRKHLLK
RSILHASFMRRSKRQIRREENEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGLQAQPIS
VPLVSNRPSDLPKQTQTTRPEPGRPLLLVVPVEVTSEVVLHSAPVTSDPPLDLPEQTQPS
GSEPTGLEPTWPEPAGPNLLVVPVEVTPYLCSHESIDSLRESIV
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggcacccctgctccctcccacaggcgctgatgcgttccgccgcttcaccccggaatcc
ctggcagagatcgagaggctcatggaggaaaagagaatagccgcggaagtagaggggtac
gtaggtgaagggccatcggagcccagcaaagacctggaagccggcaagagtctgcccatg
atctttggagacgccccaacggagatgcttaacacaccactggaggacatagaccccttc
tacaaagcacagaagacctttatcgtgatcaccaaaggaaacacaatcttcaggttcaat
gctgaatcagcttgctacattctaagccccttcaatcatcttagaagaggagccattaaa
attctcatacattcgttcatcatgattaccattctgtcgaactgcttttttatgacgatg
agcgacccaccgtcatggagtaaaactgttgagtatgtttttactggtatttataccttt
gaggcctcatgcaaagtgttgtcaagaggctttgttgtcggcccttttacattccttcga
gatccatggaattggctggatttcatggtgatcagcatggcgtacgtcacagagtttgtt
gatctaggcaacgtgtcagcccttaggacgttccgtgtactccgagcccttaaaacaatc
actgtgattcctggattaaaaaccatcgtgggcgccctggtccagtctgtaaagaaaatg
gtagacgtgatgatcctcactgtgttcgccctggccgtgtttgcgctcatcggcctgcaa
ctcttcatgggaaatttgcgcaacaagtgtgtccgatggcccatcctcaactcaacggtg
ttcgacgattacaacttcacctcgtcgcttgacggcaccatgggtttcggcgaaacatca
aattccactgttcctgtcgatttcaaggagtacatcagcaatatagagaaccactactat
ttggaaggtagtctggatgctcttctctgcggaaacagctctgatgctgggaagtgccca
gaaggattcacgtgcataaaggctgggagaaaccccaactacggctacaccagctacgac
tccttcggctgggccttcttgtccctcttcagactcatgacgcaggactactgggagaac
ctgttccaactgacacttcgagcagcggggaagacgtacatgatcttctttgtgctggtc
atcttcctgggttccttctacctcatcaacctcatcctggccgtggttgccatggcctac
gacgagcagaacgaggccactctgaaagaggcgcaggataaggaggaggagtttcagagg
cttctggagcaatacaggatccaagcccaggagcaagctgatgctgctgctggaagtcag
gcgaccctgacaagtcggaaagagcttagtcatcactctgggtcatacgggggctctgcg
gatgacgagcagagcctcggagatgatgttatcaaggactgtaatgggagaatcgtgccc
cgtctggccatcgttccagtgtcctctgagtcggagtctgttccagaggacgagctcaaa
gaggacagcatgttccatctggagcagccaggcctgaagaacagatcggcgagtgctgtt
agtgttctcaccaccgtcatggaggagcttgaagacgcccagaagccttgtccacccggc
tggtacaagtttgccgacatcttcctgaagtgggactgttgcatgccctgggtatggttg
aagaagtggttgctctttattgtgatggaccccttcgtggacctaggcatcaccatctgc
atcgtgctcaacaccctcttcatggccatggagcactaccccatgagcccagagtttgac
cacatgctctctgtggggaacctggttttcactgggatcttcacagcagagatggtcttc
aagctttgcgccatggatccgtactactacttccaggtcggctggaacattttcgacagt
atcattgtcacgttcagtctggtggagttaggtctagccaatgtccaaggcctgtccgtt
ctcaggtctttccgtttgctgcgtgtcttcaaactagccaagtcgtggcccacgctcaac
atgctgatcaagattattggcaactctgtgggcgctctgggcaacctgaccttggtgctg
gccatcatcgtcttcatcttcgccgtggtgggcatgcagctctttggcaagagctacaag
gaatgcgtgtgtaagattgccaccgactgcgagttgccacgttggcacatgcacgacttc
ttccactcattcctcatcgtgtttcgcatcctgtgcggggagtggatcgagaccatgtgg
gactgtatggaggtggccggagctgggatgtgcctggtggtcttcatgatggtcatggtc
atcggaaacctggtggtgctgaacctcttcctggccttgctgctcagctcattcagtgga
gacaacctgtccagtgatgacgacggtgagatgaacaacctccagatcgccatcggcagg
atcaactggggcatcgactgggtgaaagcctctgtccgccacatggtcctgcagctactg
ggcaaaaaggccaccggggacaaggaagggggtgaggggatcgaaggaaaccccgaaaag
gagacctttgcattaaaccacttagacacgtgccaggattccaagatggccgacgggatg
accaactgtgtggacgggcttcaggcagacggcgagatgagcctcaatgtgcccattgcc
cagggggagacggactttgagaacgatgatgactacagtgggtcttttacatcagatgaa
gaaaatggacaaggtgatcacttgaagttgttgggtgcagtgggtgacgagtcctcggtg
tgcagcacggtggactatgtacctgaaccagagcctgtggaagaggaggaagaggaggag
ccagagccagaggaaccagaagcttgcttcactgatggctgtatcgctcgatggccgtgt
ctgacatttgacgtctctcagggcagaggcaagaagtggtggaacctccgcaggacctgt
ttcaccattgtggaacacgactactttgagaccttcatagtcttcatgatcctcctaagc
agtggagctctggcttttgaggatatttacattgagaggagaagaactatcaaaatcatc
ctggagtatgcagacaaagtcttcacctatgtctttatcattgagatgctcttaaaatgg
gtggcgtacggcttcaagacctacttcaccaacgcttggtgttggctggacttcctaatt
gtggatgtttccttagtcactttaggagctaactggatgggctactctgaacttggacca
atcaagtctcttagaacactcagggctctaaggccacttcgagccctgtcaagatttgag
ggaatgagggtggtggtaaacgctcttgtcggcgccatcccctccatcttcaacgtgctg
ctggtgtgcctcatcttctggctcatcttcagcatcatgggggtcaacctgtttgccgga
aagttctaccgctgcatcaacaccaccacggaggagctgttccccatcaccgaggtcaac
aacaggagcgactgccttgccctgcagcacgccacccaggaagcccgttgggtcaacgtc
aaagtcaactacgacaacgtgggcttgggctacctctctctgctgcaagtggccacattt
aaaggctggatggacatcatgtatgctgctgtggactctcgagaagtggaggagcagccc
tcgtatgagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggctcc
ttcttcaccctcaatcttttcattggtgtcattattgacaatttcaaccagcaaaagaaa
aagtttggtgatgacatctttatgacagaggagcagaagaaatatcatgaagccatgaag
aaacttggctcgaagaagccagtgaagcctatcccaaggcctacgaacatgattcaagga
gctgtgtttgacttcatcactcagcagttctttgacatcttcatcatggtcctcatctgc
ctcaacatggtcaccatgatggtggagacggacgaccaaagcgcggagaaggaaaatgtc
ctttacaagatcaacctggccttcatcgtcgttttcaccggcgagtgtctgctcaagatg
tttgcccttcgccattacttcttcaccatcggatggaatatttttgattttgtcgtggtc
atcctgtccgtcgcgggtataatgctgtcggacatcatagagaagtactttgtgtcaccc
accttgttcagggtcatcaggctggctaggataggcagggtcctgcgtctcatcaaaggt
gccaagggcattcggacgctgttatttgcgttgatgatgtcactccctgccctgttcaac
atcggcctcctgctcttcctcatcatgttcatcttctccatattcggcatgtccaacttt
gcctacgtcaaaaaacaggctggcatcgacgacatcttcaatttccagacgttcggcagc
agtattatttgcctgtttgagatcaccacctctgcgggttgggatagtcttctgctgcca
attctaaacagcggtcctccagactgcgacccagacattgagaacccgggctcggatgtt
cggggcaactgcggcaacccaggcatgggtatcatgttcttttgcagttacatcatcatg
tccttcctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacacggcc
caagaggagagcggggacctgctgtgcgaggatgactttgtgatgttcgacgagacctgg
gagaagttcgaccttgagggcacgcagttcatcgaatacgccaagctgtcagagttttgt
gacaccctgcaggaacccctgcgtatcgccaagcccaaccggatcaagctgatctcgatg
gacctgcccctggtcacaggcgataagattcactgcctggacatcctgctggctgtcact
caggaggtgctgggcgaaggggtggagatgacggccatgaaggtgagcatcgaggccaag
ttcaacatgaacaaccccacgacagactcctacgagcccatcaccactacgctgcggcgc
aaggaggaggaggcagcagccgtgatcatccagcgggcttaccgcaagcaccttctcaag
cgctccatcctgcatgcctccttcatgcgccgctccaagagacagataaggcgggaggag
aacgaggagcccccggagacggagggacttctggtgcgaaagatgaacgtgctctatggg
agcgacctggaccttgccgcagagatggaattggctgggttgcaagcgcaacccatatcg
gtccctctggtgtccaatcggccatcggacctccccaagcaaacccagaccaccaggccg
gagcctggcagaccactcctcttggtggtccccgttgaggtcaccagtgaggtggtgtta
cactcagcccctgtgacgtctgacccgccattggacctccccgagcaaacacaaccatcg
gggtcggagcccacagggctggaacctacctggccggagcctgctgggccaaacctcttg
gtggtccccgtagaggtcaccccctatttgtgtagccatgagtcaatagacagcctgcga
gagtcgattgtataa
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integrated database retrieval system
