Oncorhynchus kisutch (coho salmon): 109865898
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Entry
109865898 CDS
T09179
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109865898
Enzymes [BR:
oki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
109865898
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109865898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1192
Motif
Other DBs
NCBI-GeneID:
109865898
NCBI-ProteinID:
XP_020309985
Ensembl:
ENSOKIG00005014859
LinkDB
All DBs
Position
LG20:25713280..25719039
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AA seq
493 aa
AA seq
DB search
MITLLIKATRQSKDKLFCRLQSNMSEELLQRVRDLEGEVGRLKAQLREKVKEGTGGEMAV
STNSDGKKDTSKPDAGGRKKGKRGSRDRPFDFSAHPRRHVALRLAYLGWAYQGFAVQENT
DSTVEARLFEALLKTRLIQDRQSSNYHRCGRTDKGVSAFSQVMSIDLRSTQFCGGLGVTL
PSNVDAGVKNEVDVAELPYVKMLNRVLPQDIRILDWSPAPQGFSARFDCQSRTYRYYFPR
GALDVTLMAEAAKRYEGTHDFRNLCKMDVGNGVLQFQRTILSATVQPVHQTPPPAPTTAD
PYDLYIFEIKGLAFLYHQVRCIMAVLLLIGQKLEPPEIVDQLLDVKTNPRKPQYSMAVDF
PLVLFDCHFEGLSWRREAEEVEHALATLQHHWTQTAVKTQVIHGMIQGLDSTGGTSSPHC
WLMEGTKQRTYRPLLERPRCESLESRIEHFVKRGRLEREEGENGGETVHKGKRPKHSHNT
SISSVLPDVSPSF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgataaccttactcatcaaagctacacgtcaaagtaaagataagttattttgccgtttg
caaagcaacatgtctgaggaattactacagagagtgagagacctggaaggagaggtgggg
agactgaaagcacagctaagagagaaggtcaaggaaggaactggaggtgagatggcggtg
tcaaccaactctgatggaaagaaggataccagcaagcctgatgctggtggcaggaaaaag
ggcaaaagagggagtcgggaccgaccatttgatttctctgcccatcctcggcgccatgtt
gcgctccgcttagcctacctgggctgggcctatcagggctttgctgtccaggagaacaca
gacagcactgtggaagcccggctcttcgaggctcttctaaagactcgactgatccaggat
cgccagagttctaactatcaccgttgtggccgcactgacaaaggagtcagtgccttttcc
caggtcatgtccatagacttgcgctccactcagttttgtggaggcctaggagtgactctc
ccgtccaatgtcgacgctggtgtcaagaacgaagtggacgtggcggagctaccttatgtg
aagatgctgaacagagtcctgccccaggacatcaggattcttgactggtcacctgctccg
cagggcttcagtgcacgcttcgactgtcagtctagaacctatcggtactacttcccacgc
ggggctctggatgtaacgttgatggcagaggctgccaaacgctacgagggcactcacgac
ttccgcaacctctgcaagatggacgtgggcaatggagtgctgcagttccagaggaccatc
ctgtctgccacggtccagcctgtccatcaaactccccctcctgcgcccactaccgcagac
ccatacgacctctacatatttgagatcaaaggactggccttcctctatcaccaggtgcgg
tgcataatggcagtgctgctgctgattggccagaagctggagcccccagagatagtggat
caactcctggatgtgaagacgaatcccaggaaaccccaatacagcatggcggtggacttt
cccctggtgctgtttgactgccattttgaggggttgagttggcgcagggaggctgaggag
gtggaacatgccctggccacgctgcagcaccactggacacagacagcagtcaagacccag
gtcattcacggcatgatccaaggcctagacagcacaggtgggacctcctctccccattgc
tggctgatggaaggtaccaaacagcggacctatcggcccttgcttgagcgtccacgctgc
gagagcctggagtccaggatagaacactttgttaaaagaggcaggcttgaacgagaagaa
ggggaaaatggtggcgaaacggtacacaagggcaaaaggccaaagcactcgcacaatacc
tccatttcgtctgtcctccccgacgtgtcgccgtccttctga
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