Oncorhynchus kisutch (coho salmon): 109866494
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Entry
109866494 CDS
T09179
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
109866494
Enzymes [BR:
oki01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
109866494
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
109866494
NCBI-ProteinID:
XP_020310772
Ensembl:
ENSOKIG00005012509
UniProt:
A0A8C7FJ64
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Position
LG21:complement(14267951..14294989)
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AA seq
959 aa
AA seq
DB search
MRTYTRGAPTVFFISLLWPLVAPVVGVAEETIDPSGGIPFMGGNYDGHPMLYFGQGEVEE
LQSAAAGTHREMAARIREAGEAMLEHPEEYLPPWSPAEFSARWNEVYGNNLGVLSMFCLL
YPHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLSKVQQE
RFLQVIGNATRYMYEKSYIRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQ
VLAIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLHKHFA
FMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAERIHQNRVLEGP
GQAGKGQRWCTLHTEFIWYDPSLTPRAPSDFGTSQLHYFEDWGVVTYGSSLPADTNHTFL
SFKSGKLGGRAIFDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGP
KYTFLNNAVLFSPATSGSCFKPWDGQVTEACDSKWLKYKVGLPADAQGRVEAALERQGMV
FIRGEGQSAYNPDLKIKSFQRNLLLLHPQLLVLVDHIHLETDSPTRAMSAFFHNTDLPFK
DTKIDGVHGAFVRHGEDPYQMFWMDDTGFSEKGVLGYWNYPRGYPYNGSNYVNVTMPLRY
PHTRVAYIFFGPGVDVQSFSLRGDANRVDIYLATNEHTYTIYLLTGEVTTKPLFAMVLVD
QKKIVFEKAAGVKNSTPEEVEEYVNVVEDNLQHAKPVFQQLERHILGRVLNTASFRKTAE
RLLQFSDKKKTEAIEKMFALTNKQGKGKGANKALGNLGDKFSESLPDIFGQIEVKEKKER
SKTTKRIIEESPEEDGDSRAFMDYGDSKKGRKGGFVKGRKFKEVHVLATANSDSLSNSSS
YIRLFLILNIATFFLLLSVLLTRFQRGRSLHTQRCFYGILLIDSFILLCLYSSCSHAQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctacacccgaggggcccccacagtgttcttcataagtctactgtggcccctg
gtggccccggtggtgggggtggcggaggagacgatagaccccagtggagggatacccttc
atgggagggaactacgatggacaccccatgctgtacttcggccagggcgaggtggaggag
ctgcagtcggcggctgctgggacacaccgggagatggccgcgaggatccgcgaggcgggg
gaggccatgctggagcaccctgaggagtacctgcccccctggagcccggccgagttcagc
gcccgctggaacgaggtgtatggaaacaacctgggagtgttgtctatgttctgtctgctc
tacccacacagggccggggctctcgacctggccaaggattacatggagaggatggcagct
cagcctagttggttggtaaaggatgctccctgggatgaggttcctctagcccactctctg
gttggctttgccacagcgtatgatttcctgtatgagtacctgagcaaggtgcagcaggag
cgcttcctgcaggtgatcggcaacgctacgcgctacatgtatgagaagtcctacatccgt
ggctggggcttccagtacctgcacaaccaccagcccaccaactgtgtggctctcctcacc
ggcagcctggtttacatgacccagggttacctgcaggaggcctacctgtggaccaagcag
gtcctggccatcatggagaagtctatggtgctgctgcaggacgtgacggatggctcgctg
tatgagggcgtggcctacgggacgtacaccacccgctctcttttccagtacatgttcctg
gtgcagagacacttctccatcagccacttcgaccacccctggctccacaaacactttgcc
ttcatgtacaggaccatcctgccagggttccagaggactgtagccatagcagattccaac
tacaactggttctacgggcccgaaagccagctggtgttcctggatcgctatgtgatgagg
aacggcagtggaaactggctggctgagcggatccatcagaaccgggtgttggaggggccg
ggacaggccgggaagggacagagatggtgcacactgcacacagagttcatctggtatgat
cccagcctgactcccagggctccatcagactttggtacatcccaactccactactttgag
gactggggggtcgtcacttatggaagttctctacccgcagacaccaaccacaccttcctc
tcctttaagtcggggaagctgggtggacgggccatatttgacatcgttcacaggaacaag
tacaaagactggatcaaagggtggcggaactttaacgctggccacgagcaccctgaccag
aacagctttacgttcgcccctaacggtgttccttttatcacggaggctctgtacgggccc
aagtacaccttcctcaacaacgcagtgctgttctccccggctacctcgggaagctgcttc
aagccatgggacggccaggtcacagaggcctgcgactccaagtggctgaagtacaaggtg
gggctgccggcggacgcccagggcagggtggaggcggctctggaaaggcagggcatggtg
ttcatccgtggggagggccagtcggcctacaaccctgacctgaagatcaagagcttccag
aggaacctgctgctcctgcacccccagttgctggtcctggttgatcatatccatctggag
acagacagcccaaccagggccatgagtgccttcttccacaacacggacctgccctttaag
gacaccaaaatagacggtgtgcacggagcctttgtcagacatggggaagacccatatcaa
atgttttggatggatgacacaggcttcagtgagaaaggggtcttggggtactggaactat
ccccgtggttacccctataacggctctaactatgtgaatgtgacaatgcctctgaggtat
ccccataccagggtggcctacatcttctttgggccaggggtggacgtgcagagctttagt
ctgcgtggcgatgctaacagggtggacatttacctggccaccaacgagcacacctacact
atctacctgctgaccggggaggtgaccaccaagcctctgttcgccatggtgctggtggac
cagaagaaaatagtatttgagaaagcagcaggagtgaagaacagcacgccggaggaggta
gaggagtatgtcaacgtagtagaggacaacctccagcacgccaagcctgttttccagcag
ctggagagacacatcctgggccgggtgctcaacacggccagcttccgcaagacggccgag
cgcctcctccagttctccgacaagaagaagacggaggccattgagaaaatgtttgctctg
actaataaacagggcaagggcaagggggccaataaagccttggggaaccttggggacaag
ttctcagagagcctgccggacatctttggacagatcgaggtaaaggagaagaaggagaga
tcgaagacaacaaagaggattattgaggagagccccgaggaagacggcgactccagggcc
tttatggattatggagactccaaaaaaggccggaagggaggcttcgtgaagggtcgcaag
ttcaaggaggtccacgtgttggcgacggccaacagtgacagtctgtcgaactcatcctct
tatatcagactattcctcatcttaaacatagccaccttcttcctgctactgtctgtgtta
ttgacacgcttccagagaggcagaagtctgcacacccagaggtgtttctatggcatcctg
ctcatcgacagcttcatcttactctgcctctactcctcctgctctcacgcacagtgttga
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