Oncorhynchus kisutch (coho salmon): 109867562
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Entry
109867562 CDS
T09179
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109867562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109867562
Enzymes [BR:
oki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
109867562
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109867562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
109867562
NCBI-ProteinID:
XP_020312371
Ensembl:
ENSOKIG00005032082
LinkDB
All DBs
Position
LG22:complement(5344093..5354461)
Genome browser
AA seq
338 aa
AA seq
DB search
MAHMVVSHEHMALQEPANIAKAPAKKRGRTAQPKEPKPPKMPKAKPGPKAKPGPKPKKGK
EGQEADGTQEKIDKTFKKVKKKRDRFKGMTEDEVMSRTLTDILDYNLDYVIIGINPGLVA
AYVGRWFPGHGNHFWKCLFLSGFTDEQLNHMSDTSLPEKYKIGFTNMVARTTPGSKDLST
KELREGALILVEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCEVA
LYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLRGVARSEEIQELEYSFDLGLAKEDAK
RMAIKEEAYDPGYEAAFGGAYGEGGPGPGPEEGQSNGH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatggttgtcagtcatgagcacatggcactgcaagagcccgccaacatagcg
aaagctccagcaaaaaagcgagggagaacggcacaaccaaaggaacccaagccacccaaa
atgcccaaggccaaaccgggacccaaggccaaaccgggacccaagcccaagaaaggcaag
gagggccaagaggcagatggcacgcaggagaaaatagacaagaccttcaagaaagtcaag
aagaaaagggaccgcttcaaaggcatgactgaggatgaggtcatgagtagaactctgacc
gacatccttgactacaacctggactatgttatcattggaatcaacccaggtctcgtggca
gcctatgttggacgatggttccctggccatggaaaccatttctggaagtgcctgttcttg
tccggattcactgatgagcagcttaaccacatgagcgacaccagcctgccagagaaatat
aagatcggcttcaccaacatggtggcaaggacaacgcctggaagcaaggacctgtcaacc
aaagagctacgcgagggcgccttaattcttgttgagaagctgaaaaagtacaagcccctc
atagctgttttcaatggaaaatgtatctatgaaatgttctgcagagagatgtttggtaaa
aagcccaagaagcttgactttggtctgcagccacacaagataccggactgtgaagtggca
ttgtatctgatgccctcgtcgagtgcccgctgcgcccagtttccccgtgcccaggacaaa
gtgcacttctacatcaagctgagggaattgagggaccagctcaggggcgtggcccgatct
gaggagattcaggagttggagtacagctttgacctgggactggccaaagaggacgctaag
aggatggcgatcaaggaagaggcgtacgacccaggctacgaggccgccttcggcggagca
tatggagagggcgggcccgggcctgggcctgaggagggccagagcaacggtcactaa
DBGET
integrated database retrieval system
