Oncorhynchus kisutch (coho salmon): 109868225
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Entry
109868225 CDS
T09179
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109868225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109868225
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
109868225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
109868225
NCBI-ProteinID:
XP_020313245
Ensembl:
ENSOKIG00005018880
LinkDB
All DBs
Position
LG2:5986423..5995222
Genome browser
AA seq
805 aa
AA seq
DB search
MDAGDDQNTGSTNGNAPSAGNSRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTTSGGGTMTNPRPLGPA
TSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIFMPGGTATAAVATVAQQQ
PQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSLSQQQQQHPQ
QQQQQFSQNTQQQQQQMANKLTSYTHPTALPSINVKTGNQLNMAPTAATSVPASSSPSPT
LPLSQLLISPSGLCQARAVTTVTPAATVTHILVPTSNVPTSSQGYPIGSVAPKTNVNTQT
LVVQPLQQSNTNLDKVSHSSGPVHIQPKTSQGHRLPVQLSPRHPPPILPAPPNMGVHHPP
HVPVQLVGARQGSVGNSQALAQARSCCPQDNGIAIASPGGNTTAKPAIGSLKRKSETDAT
NEMAVEPSQLSCPPMRDSAPLSPAPTMDSAPKVVPAFSSPPTLSLPLSWGVGGQGDRAPL
PQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMGVQQADNGGPAVLKCEYCESLA
PASQFRGSKRFCSKSCAKRYNVSCSHHFQVSRGRASARPPGPPVPPDNIVRRRGPRRSSS
EIACAKIAGRHLPVKECRSESSRSEDVSSCDEEEEEDSPSLSPSSSLSCPRPAHCDPHLD
DSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEELAAQFLSQEIDGQALLLLREE
HLISTMNIKLGPALKICAFINSLRD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgatgaccagaacacgggctctaccaatgggaatgcgccgtctgctggg
aactcccgccctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcc
cttcaggcactgcagagacagccgaacgcagcccagtacttccagcagctcatgctgcag
cagcaaatcaacagtgcccagcagcttcacaacctggctgccgtgcaacaggccaccctc
gctgctagtcgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtc
aatctgagcaccacctctgggggagggaccatgaccaatccccgccccctcggccctgcc
acatcagtgacatcatcagctctcagccaatcagtgctgctgggtgggaactcagccgga
cagggtcagatgtacctgagagtcaaccgctccctcagagcacccctcgcagcctcccag
ctcatcttcatgcctggtggcacagcaacggctgctgtagcgacagttgcacagcaacag
cctcagcagcaacaagaagtccatcccacctccaatgcccaatccgacaatgaccaggtg
cagaacctggctctccactgtatctccactcccagagtggccgcagtgaagacggagttt
ccagacaggagagacgcagctaactattctctaagtcaacaacaacaacagcatcctcag
cagcaacagcagcagttctctcagaacacccagcagcaacagcaacaaatggccaacaaa
ctgactagctacactcatcccactgctctccccagtataaatgtcaagactggaaaccag
ctgaatatggccccaaccgctgccacctcagttcctgcctcctcctccccctctcccacg
ctccctctctcccagctcctcatctccccctcaggcctatgtcaggcccgggcggtaacc
acggttacccctgctgccacagtgacgcacatcctagtccccacctccaacgttcctacc
tcctctcagggctaccccataggttcagtcgcccccaaaactaacgtcaacacccagacc
ttggtggtgcagccactgcagcagtccaacactaacctggacaaggtgagccacagctct
ggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtccagctttcc
ccacgccaccctccacctatcctcccggctccgcccaacatgggggtccaccacccgccc
catgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcccaggctttg
gcacaggcccgaagctgctgcccccaggacaacggcatcgctatagcctctcctggaggg
aacaccacggcaaagcctgcaattggctcattgaagaggaagtcggaaactgatgcaacc
aatgagatggcagtcgaaccttcccaactttcctgtccaccaatgagagattccgcccct
ctatctcccgcccccacgatggactcagctcctaaagtagtgccagccttctcctctccc
cccaccctgtctctacccctgtcttggggggtggggggtcagggagacagagcccctctt
ccccaggcggtggtcaaacctcaggtcctcacccacctcatagagggttttgtcatccag
gagggagctgagcctttccctgtgactgggccagtgaaggagccactagccatgggtgtt
caacaggctgacaatggaggccctgcagtgttgaagtgtgagtactgtgagagcttggct
ccagccagccagttcaggggctccaagaggttctgctccaagtcctgcgctaagagatac
aatgtgagctgcagtcatcacttccaggtcagtagggggcgagcttctgcacggccgcct
ggtcctcccgttcccccagacaacatcgtcagacgcaggggtcctcgcaggagtagctcg
gagatcgcctgcgctaaaatagccggcagacatttgcctgtcaaggagtgtcgttctgag
tccagtcgctcagaggatgtgtccagttgtgacgaggaggaggaggaagattccccatca
ctctcccctagctcctccctctcctgccctaggcccgcccactgcgatccccatttggac
gactcagctcaaggcagcctcccattggatgaggccaacttcctgtctgggagccccgcc
cattggggtgtggaggaggtctgcaggttcatctcttcactgcaaggttgcgaggagctg
gcagcccagttcctgtcccaggagattgacggacaggccctgctgctactcagagaagaa
cacctcatctccaccatgaacatcaaactaggacccgccctcaagatctgtgccttcatc
aacagcctacgagactga
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