KEGG   Oncorhynchus kisutch (coho salmon): 109868395
Entry
109868395         CDS       T09179                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X4
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109868395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109868395
   04121 Ubiquitin system [BR:oki04121]
    109868395
   03036 Chromosome and associated proteins [BR:oki03036]
    109868395
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     109868395
Transcription factors [BR:oki03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109868395
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     109868395
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109868395
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109868395
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_At1g61320_AtMIF1 PsbP
Other DBs
NCBI-GeneID: 109868395
NCBI-ProteinID: XP_020313512
Ensembl: ENSOKIG00005009794
UniProt: A0A8C7DSF4
LinkDB
Position
LG23:13455664..13511140
AA seq 1401 aa
MEASAESGRKLRSICRTMYDENEDFSDVEEIANVRGFNLEEKLVSDSYNTHFVQLMDGKD
FTYEYVQREALQTPLIFKAKDGLGIRMPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEM
SMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPLKLKRRQ
TEATNVISEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHVFKGGKVFWLVPPTPHNL
ALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLSIYEIENRTKVHSKFRYPFYHEMCWYVLERYVHCLTKRSHLTPEFRREPLLI
DLETKLSTESPSSDSRSQDMDEEDSCETQQGRDEQGDRSAFDDPCSPDNRKGKSSGLRHL
KAALSNDSEDSCIPTSTQPPEFSKIPFGSPVSESPSKWTHLTEFELKGLKALVEKLEALP
ENKKGVPDGIKDPQALLEDMKVVLKEHEDDDPKMAATGVPVVFWPKKSAKQQRPPNRPKP
KMAASSPAAAVKLSASRSTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQ
SCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEDKFNRMLMECSICNEIVHPLCLKVKD
SGGVVNDELPNCWECPKCNHSGKTGKAVKQKRGPGFKYASNLPGSLLKDSRLNRDIKEEP
DPPSLPTSPTGTTATVATVKRKAERDDTPKTKAEESPPLKKRSPMLSLGGLPRPRPEDNP
LRKKRMLFDIKDEDEPPVVKKKKKPPKPDDLLIPKLLKTIKQEQVDEDDEHKDHEDEEED
RCTADRVVTKGKREEEEEDGDEEEEKDGGVEDSKDGTVKTMLSPLLRTSRARESDQSCSS
SPRAGPSSVGCDAPEKTPGQLKARKRRRLPNKELSKELSKELNLEIQKTEDCLANQNRRP
LKREDSPANNSRRPLKTEDTLTNPNRRPPKTEDSPANHNRRPIKTEDGLSNHNRRPLRTE
DCLVNQNHRPMKTEPESDGEEPKPKRPLNNCTSDLGDWLHPRGRELNGTPRQLSPLGWNR
SPPITPICPRPPPCRSPPKCVQMERHVIRPPPISPPPDRLPLEDGQTHMMHREVWMAVFG
HLAHRDLCVCMRVCKTWNRWCCDKRLWTRIDLNRCKSITPLMLSGIIRRQPVALDLSWTN
ISKKQLSWLINRLPGLRMLLLSGCSWVAVSALCTASCPLLRTLDVQWVEGLKDAQMRDLL
SPPTDNRPGQLDNRSKLRNVVDLRLAGLDITDTSLRLLIRYTPQLTRLDLSYCNHVTDQS
VNILTAAGTTTRDSLTDINLSVCNRVTDQSLAYFKRCGSICHIDLRYCKQVTKEGCERFV
AEMSVSVQFGLVEEKLLQKLC
NT seq 4206 nt   +upstreamnt  +downstreamnt
atggaagcgagtgcagaatctggacgcaaactgcgctccatctgccggacaatgtatgac
gaaaacgaggacttctctgacgttgaagaaattgcaaatgtcaggggtttcaatttggag
gagaaacttgttagtgactcatacaacacacatttcgttcagttgatggatggcaaagat
ttcacttatgagtatgttcagagagaggcacttcagacccctcttattttcaaagccaaa
gatggactgggaatcagaatgccagacccggagttcaccgtcagtgagattaaaggtttg
gttggtagccgtcgtgccgttgatgtgatggatgtgagcacccagaaaggctctgagatg
agcatggcccagtttgtccgctactatgagacgcctgaggaagagagggacaaactcttc
aatgttatcagcctagagttcagccacaccaaactggagaacctcatcaagaggcccact
gtggtggatttagtggactgggtggacaacatgtggcccctaaaactgaaacgaagacaa
accgaagccactaatgtcatctcagagatgaagtaccccaaagtacagaagtactgtttg
atgagcgtgaagggctgctatactgacttccacattgatttcgggggcacgtctgtgtgg
tatcacgttttcaagggagggaaggtgttctggctggtgcctccgacgcctcataacctt
gccctgtatgaggactgggttctgtcaggcaagcagagtgacatcttcctgggagaccgt
gcagatggctgccagagggtggagctgaaacagggctacaccttcttcatcccctctggc
tggattcatgcagtctacacccctgaggacacgctggtgtttggaggcaacattctgcac
agctttaacattcccatgcaactctccatctatgagatagagaataggactaaggttcat
tccaagttccgctacccattctaccatgagatgtgctggtatgtcctggagaggtacgtg
cactgcctgaccaagcgctcccatctcactccggagttccgcagagagcctctgctaatc
gacttggaaactaagctgagcacagagagcccctcctctgactcccggagtcaggacatg
gacgaggaggactcctgcgagacgcagcagggacgggatgaacagggtgacaggtcagca
tttgatgatccctgctctcctgataacaggaagggtaaatccagcggccttcgacacctc
aaagctgccttgtccaatgattctgaggacagctgcatccccacctccacccagcctcca
gagttctccaaaatcccctttggctcgccagtctcagagtctccgagtaaatggactcat
ctgactgagtttgaactgaagggcctcaaggcccttgtggagaaactggaagccctccct
gaaaataagaagggtgttccagatggcatcaaggacccccaggccctgctggaggacatg
aaggttgtcttgaaggaacatgaagatgatgaccccaaaatggctgccactggagtacct
gtggtgttctggcccaagaagtctgccaagcagcagcggcctcccaacagacccaaaccc
aaaatggcggcctcgtctcctgcggcggcggtcaagctgtcggccagccggagcacgtct
ggcgccaggaggagaaggacgcgttgtcggaagtgcgaggcgtgcctgaggacagagtgt
ggagaatgccacttctgtaaagacatgaagaagttcggagggccaggtcgcatgaaacag
tcctgcatcatgaggcagtgtatagcgcctgtcctgccccacacagcggtgtgtctggtg
tgtggagaggcagggaaggaggacacagtggaggaagaggaggacaagtttaaccgcatg
ctcatggagtgctccatctgcaatgagatagtccatcctctctgcctcaaggtgaaagat
tctggtggagttgtaaatgacgagttgccaaactgctgggagtgtccaaaatgcaaccat
tcagggaagacagggaaagccgtcaagcaaaaaagaggaccagggttcaagtacgcgtcc
aatcttcccgggtcgctgctgaaggactcgcgattgaaccgtgacatcaaggaagagccc
gacccgcccagtctgccaacatcacccactgggaccacggcaaccgtggccacagtgaag
aggaaggcggagcgtgatgacacccccaaaacgaaagcagaggaatctcctcctctgaag
aaacgttctcccatgctgtctctgggcgggctgccccgacccaggcctgaggacaaccct
ctgaggaagaagaggatgctgttcgacatcaaagatgaggacgagcctcctgttgtcaag
aaaaagaagaagcccccaaaacctgatgaccttttgatccccaagctgttaaagaccatc
aagcaagagcaagtagatgaggacgacgaacacaaagaccatgaagatgaggaggaggac
agatgcacagcggacagggttgtaactaaagggaaaagagaagaggaggaagaggatgga
gatgaagaggaggagaaagatggtggtgtagaggacagtaaagacggtacagtaaagact
atgctgagtccactgctacggacgtctagagccagagagagtgaccagtcctgctccagc
tctccccgggcagggcccagcagtgtagggtgcgatgccccagagaagacacctggccag
ttgaaggcacgcaagcgccgccgcctccccaacaaagagctgagcaaggagctgagcaaa
gagctcaatctggagattcagaagaccgaggactgcctggccaatcagaaccgcagacca
ctgaagagggaggacagcccagccaataacagccgtcgacccttgaaaactgaggacacc
ttgaccaatccgaaccgcagaccaccaaaaacagaggactctcctgccaatcataaccgc
aggccaattaagactgaggatggtctatccaatcacaaccgccggccattgaggaccgag
gactgcttagtcaatcagaaccacaggccaatgaagacagagcctgagagcgacggggag
gagcctaagcccaagcggccactcaacaactgcaccagtgacctcggagactggctccac
cccagggggcgggaattaaatgggacgccccgccagctctcgcctctggggtggaatcgc
agccctccgatcacacctatttgcccacgccctcctccctgccgctcaccacccaagtgt
gtccagatggagcgtcacgtgatccggccgcctcccatcagccccccgccagacagactg
cccctggaagacggacagacccacatgatgcacagggaggtgtggatggccgtgttcggg
cacctcgcacacagagacctttgtgtctgcatgcgcgtctgcaaaacctggaacagatgg
tgctgtgataagaggctgtggacgcggatcgatctgaaccgctgtaagtccatcactccc
ctcatgctgagtggtatcatccgcagacagcctgtggctctggacctcagctggaccaac
atctccaagaagcagctcagctggctcatcaacaggctgccaggtctgcggatgctgctg
ctctcaggctgctcctgggtggctgtgtctgccctctgcaccgccagctgcccgctgctg
aggaccctagatgtccagtgggtagaggggctcaaagacgcccagatgagggacctactc
tcaccccccacagacaacagaccaggtcagctggacaacaggagtaagctgcggaatgtg
gtggacctgcgtctggccgggctggacatcacagacacctccctgcgcctcctcatccgc
tacacgccccagctgaccaggctggacttgagctactgcaaccacgtcactgaccagtcg
gtcaacatcctgaccgcggctgggaccaccaccagggactcgctcactgacatcaacctc
tctgtgtgcaacagagtcacggaccagtcgctggcctacttcaagcgctgtggaagcatc
tgtcacattgacttgcgctactgcaagcaggtgaccaaggagggctgtgagcggttcgtt
gctgagatgtcagtgagtgtacagtttggacttgtagaggagaaactactgcagaaactc
tgctag

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