Oncorhynchus kisutch (coho salmon): 109868524 Help Entry 109868524         CDS       T09179                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04010   MAPK signaling pathway oki04137   Mitophagy - animal oki04141   Protein processing in endoplasmic reticulum oki04210   Apoptosis oki04217   Necroptosis oki04621   NOD-like receptor signaling pathway oki04622   RIG-I-like receptor signaling pathway oki04920   Adipocytokine signaling pathway oki05132   Salmonella infection oki05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     109868524  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     109868524  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     109868524   09143 Cell growth and death    04210 Apoptosis     109868524    04217 Necroptosis     109868524  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     109868524    04622 RIG-I-like receptor signaling pathway     109868524   09152 Endocrine system    04920 Adipocytokine signaling pathway     109868524  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109868524   09171 Infectious disease: bacterial    05132 Salmonella infection     109868524  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109868524    04121 Ubiquitin system [BR:oki04121]     109868524 Enzymes [BR:oki01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109868524 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      109868524 Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     109868524 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 zf-C3HC4_2 TRAF3_RING zf-C3HC4_4 SlyX zf-RING_5 Sina_ZnF zf-RING_4 Motif Other DBs NCBI-GeneID:  109868524 NCBI-ProteinID:  XP_031659136 Ensembl:  ENSOKIG00005017713 LinkDB All DBs Position LG23:complement(26345970..26369211) Genome browser AA seq 595 aa AA seqDB search MATEEPSPPSSMESNKPGFPKQILANKLEDKHLCNCCQKLLRRPFQAQCGHRFCSYCFNR TVRDGPQKCSACIKEDIFEEPTSILKQGCAFPDNAARREVENLSVVCINEGCAWKGNIKE YELSHEGKCDYMIIPCPSCKEQIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLELHHSLRELEARVSQLSTTSTGPPVQ GATNSSSSPGLSGPPALALPLPPPPALAPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA ELGRRCTDLEVKAGMFENVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLER TVGLKDLTVAEMEGRLREISGTTFDGIFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDA FRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL NT seq 1788 nt NT seq  +upstreamnt  +downstreamnt atggccacggaagaaccatcccctccgtcgtccatggagagcaacaaacccggcttcccc aaacagatcctggccaacaagctggaagataaacacctgtgtaactgctgtcagaagctg ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatagg actgtcagagatggacctcagaaatgcagtgcttgtatcaaagaggacatttttgaagag cccacgtcgattctaaaacaaggctgtgcttttcctgacaacgcagctcgacgagaggtc gaaaacctctctgttgtctgcatcaacgaaggctgtgcctggaaaggcaatattaaagaa tatgagttgagccacgaggggaagtgtgactacatgatcatcccctgcccctcctgtaaa gagcagatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaact ctcaactgcaagtactgcaaggagccattccatttcaaaaacatcaaggcccacgacgag atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatacccagggag aagtacgtggaccacattaagttctgcagcaaattcagaactccatgcagattccatgtt gttgggtgtgatatgtcagtggagaaggagaggatccatgaccacgagagggcctgcgcc tatgagcacctcaacttgctgctgcactacattatggggatgaaggtgagcatggagggc ctgcagccgcaaggcctggagctggctggacacaagctcctggagctccaccattccctc agggagctggaggcacgcgtctcccagctcagcactacctccaccgggcctcccgtgcag ggggccaccaactcttcttcctcccccggcctctccgggcctcccgccctagctcttccc ctgcctccacctcctgccctggcccccaccctgactgtgtccacctccttcacccccttg cccagctcggtgggggcggccctggagctacagctccacagtgagaagaccaaggtggca gagctgggacgcaggtgcaccgacctggaggtgaaggcggggatgtttgagaatgtggtt tgcgtgttgaaccgagaggtggagcgctttgccacaaccatggaggccagtaacagacag catcgcctagaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg acggtgggcctgaaagacctgacggtagcagagatggaaggcaggctgagggagatatcg ggcaccacattcgacggcatcttcatctggaggatctctgactttaccaaaaaaagacag gatgccatcgctggccgagctcctgccatgttctcaccagccttctacaccagtaaatac ggctataagatgtgtctgcggatctacctgaacggggacgggacagggcgtggcagccac ctgtctctgttctttgtggtgatgaggggactgagtgatgctctgctcaaatggcccttc aaccagaaggtaactctgatgctgctggaccagagtaacagggagcacatcatcgatgcc ttccggcccgacgtcacttcctcctccttccagaggcctgtaagtgagatgaacatcgcc agcggctgcccgctcttctgcccgctctccaagctcgatgccaagaactcctacattcgc gacgacaccattttcattaaggccatcgtggatctcacaggcctctaa

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