Oncorhynchus kisutch (coho salmon): 109870002
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Entry
109870002 CDS
T09179
Name
(RefSeq) cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00260
Glycine, serine and threonine metabolism
oki00270
Cysteine and methionine metabolism
oki00670
One carbon pool by folate
oki01100
Metabolic pathways
oki01230
Biosynthesis of amino acids
Module
oki_M00035
Methionine degradation
oki_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109870002
00270 Cysteine and methionine metabolism
109870002
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109870002
Enzymes [BR:
oki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
109870002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
109870002
NCBI-ProteinID:
XP_020315910
Ensembl:
ENSOKIG00005030892
LinkDB
All DBs
Position
LG2:64485147..64504072
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AA seq
613 aa
AA seq
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MPSVPSSIDSVHPVSSVCPHAAMLHNNATKANGDAAILNGGSKVNGEAMENLGLFNMNGL
AQVNGEEGENDLENTVTGTEERQWIRPDLPSRCTWKLGMSSAESPHCHSAKTEAPRILPN
ILRRIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERAGILKPG
DTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTAARFDS
PESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGG
TITGIARKLKERCPNIKIVGVDPEGSILAEPEELNMTDKTQYEVEGIGYDFIPTVLDRSV
IDKWYKSNDEESFAMSRMLIREEGLLCGGSSGTAMAAAVKMSTELKEGQRCVVILPDSIR
NYMSKFLSDNWMCDKGFLTPNDLMVSKSWWWNLTLQSLNLCAPITVLPSVNIKKTIKILK
EKAFDQAPVVDESGMILGMLTLGNMLSSVLAGKVKASDPVSKVLYKQFKQVRLTDNLGKL
SRILETDHFALVVHDQIQFMADGSSCLRQMVFGVVTSIDLLNYITTRERRGSARERTMSE
CSMTSECSLTDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagttccctccagcatagactctgtgcaccctgtgtcctccgtctgcccccac
gcagctatgcttcacaacaacgctaccaaggccaacggagacgccgccattttgaatggg
gggtccaaggtcaatggagaagcaatggagaacttggggttgttcaacatgaatggattg
gcccaagtgaatggggaggagggggagaacgacctggagaacacagtcacaggcactgag
gagaggcagtggatccgtcctgatctgcccagtagatgcacctggaaattgggcatgtcc
tctgccgagtcccctcactgccactctgcaaagaccgaagcccccagaattctacccaac
atcctcaggaggattggagacacacctttggtccgcatgaacaagatacccaaagccttc
ggcctcaagtgtgaactcttggccaagtgtgagttcttcaatgcagggggcagtgtgaag
gaccgtatcagtctgaggatggtggaggatgcagagcgagctggcatcctcaaacctgga
gacaccatcatcgagcccacctccggcaacaccggtattggtctggccctggccgctgca
gttaaaggctatcgctgcatcatcgtcatgcctgagaagatgagcatggagaaggtggat
gtgctgagagccttgggggcggagatcgtgcgtacccccaccgccgcccgttttgattcg
ccagagtcccacgtgggcgtagcctggcgtctgaagaacgagattcctaactctcacatc
cttgaccagtaccgtaacgctagcaaccccctggcccactacgacactactgccgaggag
atcctggagcagtgcgatggtaaggtggacatgttggtggcaggagctggcacaggtggc
accatcactggcatcgcccgcaagctgaaggagagatgccccaacatcaagatcgtgggc
gtggaccctgagggttctatcctggctgagccagaggagctgaacatgacagacaagacc
caatacgaggtggagggcatcggatatgacttcatccccaccgtgctggacagatctgta
attgacaagtggtataagtccaatgatgaggagtcctttgccatgtcacgcatgctgatc
agggaggaggggcttctttgcggaggtagttcaggcacggccatggctgcagcagtgaag
atgagtacagagctgaaggagggccaacgctgtgtcgtcatcctgcctgactccatccgc
aactacatgtctaagttcctcagtgacaactggatgtgtgataagggctttctaacccca
aatgacctgatggtgtccaaatcctggtggtggaacctgactctgcagagtctgaacctg
tgtgcccctatcaccgtgctgccctccgtcaacatcaagaagaccatcaagatcctcaag
gagaaggccttcgaccaggcacccgtcgttgacgagtccggcatgatcctagggatgctt
accctgggcaacatgttgtcttctgtgctggctgggaaggtcaaggcgtctgaccctgtc
tccaaggtgctctacaaacaattcaaacaggtgcgactgaccgataacctgggtaagctg
tcccgtatcctggagacagatcactttgccttggtggtgcatgaccagattcaattcatg
gcggacggctcctcctgtctgagacagatggtgtttggggtggtgacgtccattgaccta
ctcaactacatcaccacgcgcgagaggcggggaagcgcacgggagcgcacgatgtcggag
tgctccatgacatctgagtgctcgctgaccgacgagctgtaa
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