Oncorhynchus kisutch (coho salmon): 109870037
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Entry
109870037 CDS
T09179
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00514
Other types of O-glycan biosynthesis
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109870037 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109870037 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109870037 (rfng)
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
109870037 (rfng)
Glycosyltransferases [BR:
oki01003
]
Glycan extension
O-Glycan
109870037 (rfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
109870037
NCBI-ProteinID:
XP_020315944
Ensembl:
ENSOKIG00005011311
UniProt:
A0A8C7FCU0
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All DBs
Position
LG25:complement(22804511..22820381)
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AA seq
419 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLLIPALQPSQHQGDLPQPRAHTKPARAGTGASKIPQ
HPGGLVVPLQADVGKVTVGNYGIDGGSIGQGTPRETKRTVDGDWVYTAGRGDTQGNGKHT
DSQTGPKEAFPHRAGVVVGAGGSRSRTPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKA
KEQTFIFTDGEDQELRRRAGANVVNTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMD
DDNYVIVPSLLKLLSSFQHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFC
ISRGLALKMSPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLQR
LPTDTVLEQVTLSYGGFENRRNVVSIGGAFSLVEDPSRFKTVHCLLYPETDWCPSKAHH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagttgtgctttctgttctccctggccctctgt
gccctcctgctgctcctcatccctgccctccagccctcacagcatcagggggacctgcct
cagccccgggcccacaccaagcctgcccgggcgggcacaggtgcaagcaaaatcccccag
caccctggaggtctggttgtccctctccaggcagatgtggggaaagtgacagtgggaaat
tatgggattgatggtggatctatagggcagggcacacccagagagaccaagaggactgtg
gatggggactgggtgtatacagctggtcgaggtgacacccagggcaatgggaagcataca
gactctcagacagggccgaaggaggccttcccccacagagctggagttgtggtgggggct
ggagggtctcggtccaggacccctctagagctgaaagacattttcatagcggtgaagacc
accaggaagtaccacaagtccagactggatttactgttccagacctgggtgtccaaagcc
aaagaacagacctttatattcactgatggggaggatcaggagctgaggaggagagcaggg
gctaatgtcgtcaacaccaactgttcagcagcacacacgcggcaggccctgtgctgtaag
atgtctgtggaatacgacaagttcatcgagtcgcagaggaaatggttctgccatatggat
gatgataactatgtgattgtacccagtctgctgaagctgctgtcctccttccaacacacc
caggatgtttacctgggccggcccagcctcgaccaccccatagaggctgcagagagggtc
aagagtgatggatctgtgtcagtgaagttctggttcgctacaggaggtgcagggttctgt
atcagtcgtggtctggccctcaagatgagtccatgggctagtctggggaacttcatcagc
acggcagagaagatccgtctccctgacgactgcactatcggttacatcatcgaggcgctg
ctggaggtgacgctgacacacacccacctcttccactcccacctggagaacctgcagagg
ctgcccacagacaccgtgctggaacaggtcactctgagctatgggggttttgagaacagg
aggaatgtggtcagcattggaggagccttctctctggtggaggacccctcacggtttaag
actgtccactgcctcctctacccagagactgactggtgtcctagtaaggctcaccattga
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integrated database retrieval system
