Oncorhynchus kisutch (coho salmon): 109870363
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Entry
109870363 CDS
T09179
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109870363
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109870363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109870363
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109870363
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109870363
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
109870363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
109870363
NCBI-ProteinID:
XP_020316438
Ensembl:
ENSOKIG00005043869
LinkDB
All DBs
Position
LG25:complement(4411067..4435825)
Genome browser
AA seq
1063 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKSGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTEVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAYYQPSALLLDTEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPATQADAVDLPSLTKHKDSWDTMSLSSGGSDTVEVQHVG
AGVLGRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDPKSPDKDSWPCELEISAGLE
NDVNSKRPLKDDLADFRESATFSQDSMPEDLYVSTPGADHLSENTASSGSDSEAQGPFTP
LTGSSNPASVGSDQEEPSTKTHVPSEVYFHTEVPSSHSDCVERTAITPDLPVTETPQEKK
TEDSAKSTSAPSAHTNLCLTTSVHSRRMSTDSITHSHSWISEDDIYKPHLEELVDPDESL
LGSGQACVNGLTSPPSEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGLWRDY
YCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLHLRAANHDEA
EDWVDRIAEAVSKCRPLHLLDDHSEVLQPIDSFVILEEPPKSYPSSPSVPTSPEQGGTVV
EQEQQPPLELDWTRPTDPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNGFQVQDGR
KVLCCSHPIEGIRDVVPDVSLGGPAFFRVVTTGDTLKLRAKSPEEARAWRGLIRGALDSY
LESGENGEPNSPGLATGAGGNIHRLVQHRLKGGGVLLAHLYTVPTEKGLDLQGFKCAGCP
KLVGVSRGKARLCEFSGKYYCEACHQGDVIAIPSRMVHNWDLTPREVSRQALELLAQVEH
EPLLNLHLLNPNLWEHVEAMAQAHSLRQRLQLVGKYLLTCRSGPCKNIQTRLGLRTYLLE
SSHLYSVMDLQQIAEGTYVAYLNMLILFASNHVQQCDLCTQRGYICQICHASDIIFPFQF
DTTVRCKECKAMFHATCKAESSSCPRCLRLQRYLESDLQDCSV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagatacggggccagaggcggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctacgtgatgaccgatgcc
gtggtaaccagcgaggatggcgacgccaacctgctgtgctcttccctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaagtccggaggacatggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagccttctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggaggtgggtcgctgc
cgggcttggctgcggctggccctcaaccatggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaacctgcaggcctactaccagccctccgccctgctcctggacact
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctggtcttcaacctt
tcgtacaagtcggccgtgctcaatgagtggaccaccaccccactggctctggccggcctc
tgccccgccacacaggccgacgctgtcgaccttcccagtctcaccaaacacaaggattct
tgggatacgatgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgtgggg
gcaggggtgctagggagggtgattggtggagtctcagggggtaggacccctctgaattct
tctaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcagac
cccaagagcccagacaaggattcctggccatgtgaactggagatctctgccggactggag
aacgatgtcaattccaagaggcctcttaaagatgatctggcagacttcagggagagtgcc
accttcagtcaggactccatgcccgaggatttgtacgtttccactccgggtgcagaccac
ctctcagagaatacggcctccagtggctctgacagcgaggcccaggggccattcacaccc
ctcactggctcctctaaccctgcttcagtggggtcagaccaggaggagccgtccactaag
acccatgtcccttccgaagtgtactttcacactgaagtgccctccagtcacagtgactgt
gtggagagaacagcgataacgcctgacctgcctgtcacagaaacgccacaggagaaaaag
acagaagattccgctaagagcacctcggcgccttcagcccacacaaacctatgccttact
accagtgtgcatagcaggaggatgtctacagactcaatcacacattcccactcctggatc
tctgaggatgacatctataagccacaccttgaggaactggttgaccccgatgagtcatta
ctagggtctggccaagcttgtgtgaatggattgacctctcccccttcagagcctgagact
ccccagtctccccccagcgtggttcaccgcaggcagataggcctgtccaaccctttccgt
gggctgctgaagctgggccatctggagcggcggggcgctgtgggcttgtggcgggactac
tactgcgagctctcgcccttcgagttccgcctctacctgaacgcagaagagcgcacctgc
tgtgacaactgctccctgctgcgttgcgaagacgcccgcgtcacctcggccgagggccgc
ttcgacctggccttcccagggaagaggctccacctgcgggcagccaaccacgacgaggca
gaggactgggtggaccgcatcgcagaggccgtcagcaagtgccgcccgttgcacctcctt
gacgaccattcagaggtgctgcagcccattgacagctttgtcatcctggaagagccccca
aaatcttacccttcgtccccctccgtacccaccagccctgagcaagggggtactgtggtt
gagcaggagcagcagccgccacttgagctagactggacgcgtcccacagaccctgagtca
gacgccattaaggaggcggtgctgtacctatcccaggacgcagaggctcgcaactggact
cctctggtcttctccctctccttggagactctcaacggctttcaggtacaggatgggcga
aaggtgctgtgctgctcccaccccatcgaggggatacgggacgtggtcccagatgtttct
ctggggggaccggccttctttagggtcgtaactaccggagatacgctcaagctgagggcc
aagagccctgaggaggcacgtgcctggaggggcctcatcaggggagccctggactcctac
ctggagagtggagagaacggggagcctaatagccccggattagccactggggcagggggg
aacatccacagactggtgcagcatagactgaaggggggcggggtgctgctggcccatcta
tatacagtgcccacggagaagggcctggaccttcagggcttcaagtgtgcaggttgtcca
aagctggtgggagtctcccggggaaaagccagactgtgcgagttctcagggaagtactat
tgcgaagcttgtcaccaaggtgacgtcatcgccataccctcccgcatggtgcataactgg
gacctcacgcctcgcgaggtctccagacaggccctcgaactgctggctcaggttgaacat
gagcccctgctcaaccttcaccttttgaaccctaacctgtgggagcatgttgaggccatg
gcccaggcacacagtctcagacagaggctgcagctggtaggaaagtacctgctcacctgc
cgcagtgggccatgcaagaatattcagaccagactgggcctaaggacatacctgttagaa
tcaagccatctctacagtgtcatggacttacaacagatagcggagggaacatatgtggcc
tacttgaatatgttgatcctgtttgcctccaaccacgttcaacaatgtgacctttgcacc
cagaggggctacatctgccagatctgtcatgccagtgacatcatcttccccttccagttc
gacaccactgtcaggtgtaaagagtgtaaggcaatgtttcacgcaacctgcaaggccgag
tcgtcctcctgtccacgatgcctgcgtcttcagaggtacctcgagagcgatctgcaggac
tgctctgtttga
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