Oncorhynchus kisutch (coho salmon): 109871016
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Entry
109871016 CDS
T09179
Name
(RefSeq) cystathionine beta-synthase isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00260
Glycine, serine and threonine metabolism
oki00270
Cysteine and methionine metabolism
oki00670
One carbon pool by folate
oki01100
Metabolic pathways
oki01230
Biosynthesis of amino acids
Module
oki_M00035
Methionine degradation
oki_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109871016
00270 Cysteine and methionine metabolism
109871016
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109871016
Enzymes [BR:
oki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
109871016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
DUF7317
Motif
Other DBs
NCBI-GeneID:
109871016
NCBI-ProteinID:
XP_020317352
Ensembl:
ENSOKIG00005030358
LinkDB
All DBs
Position
LG26:complement(23156944..23187562)
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AA seq
625 aa
AA seq
DB search
MSSVFSSTDSVGAEPSFCPNAAKLSNAQANEVVAILKGGSKVNGEAMLNGHKLSMNGSAQ
VNEDSAGCKAQNGSVHVNGHEGEKDLEKAAAGVEERQWIRPDLPSKCTWKLGGSSVESPH
CHSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVEDAERNGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTTARFDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEG
IGYDFIPTVLDRSVVDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTPEDLMVSKPWWWNLSLQGLNLFSPLTV
LPSVNIKKTIKILKEKAFDQAPVVDESGVILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLTDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDMLNYITT
RERQGSTRERTLSECSITSECSLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttttctccagcacggactctgtgggcgccgagccctccttctgccccaac
gcagccaagctcagcaacgcacaagccaacgaagtggttgccattttgaaaggggggtcc
aaggtcaacggagaagccatgttgaacggccacaagctctccatgaatggatcggctcaa
gtgaatgaggacagtgctggctgtaaggcccagaatgggtcggtccatgtgaacgggcat
gagggggagaaagatctagagaaggcagccgcaggcgtggaggagaggcagtggatccgt
cctgacttgcccagcaaatgcacttggaaactgggcgggtcttccgtagagtcccctcac
tgccactctgaactgactgaagctcccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagccttcggccttaagtgtgaactc
ttggccaagtgtgagttctttaatgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggaggatgcagagagaaatgggatcctcaaaccaggagacaccatcatcgagccc
acctctggcaacacaggtattggtctggccctggcctctgcagttaaaggctatcgctgc
atcatcgtcatgcctgagaagatgagcatggagaaggtggatgtgcttagagccttgggg
gcggagatcgtgcgtaccccaaccaccgcccgctttgattcgccggaatcccacgtgggc
gtggcctggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaagagatcctggagcagtgtgat
ggtaaggtggacatgttggtggcaggagctggcaccggtggcaccatcactggcatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagaggagctgaacaaaacagataagacccagtacgaggtggagggc
attggatacgacttcatccctactgtactagacagatctgtagttgacaggtggtataag
tccaatgacgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggtacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgataactggatgtgtgataagggcttcctaaccccagaagacctgatggtgtcc
aaaccctggtggtggaacctgagtctgcagggtctgaacctattttcccccctcactgtg
ctgccttcagtcaacatcaagaagaccatcaagatcctcaaggagaaggccttcgaccag
gcacccgtcgttgacgagtccggcgtgatcctagggatggttaccctgggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caattcaaacaggtgcggctgacagataacctgggtaagctgtcccgtatcctggagaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgaccgccattgacatgcttaattacatcaccacg
cgcgagcggcagggaagcacacgcgagcgcacgctgtcagagtgctcaataacgtcagag
tgctcgctgaccgactag
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