KEGG   Oncorhynchus kisutch (coho salmon): 109871091
Entry
109871091         CDS       T09179                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109871091 (kdm6a)
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     109871091 (kdm6a)
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     109871091 (kdm6a)
   Histone demethylases
    109871091 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_8 TPR_2 TPR_17 TPR_12 TPR_16 TPR_11 TPR_CcmH_CycH TPR_7 TPR_19 TPR_9 ARM_TT21_C RPN7 ANAPC3
Other DBs
NCBI-GeneID: 109871091
NCBI-ProteinID: XP_020317508
Ensembl: ENSOKIG00005031388
LinkDB
Position
LG26:complement(19232035..19317323)
AA seq 1524 aa
MKSCGVSLDVAASATARSLGAAGDEENKMAAGKANEIEEDFPKLTSQERESLVKIDSSLF
GFQRLHEDGARTKALLLKAVSCYDSAILKAEGKVEPEMFCQLGHFNLLLQDYPKALSAYQ
RYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWSPFSLSRPVQPPSSEAQAGQRRAIKAFQE
VLYVDPSFSRATEIHMRLGLMFKGNTDYESSLKHFQLALIDSNPCTLSKAEIQFHIAHLY
EIQKKFRAAKEAYESLLQTENLPAQVKATTLQQLGWMHHTVELLGDKGSKDSYAIQCLQK
SLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPM
DALQAYICAVQLDHSHAAAWMDLGTLYESCGQPHDAIKCYINATRSKSCTNTAALTHRIK
LLQAQLCNPQPGSLAGGKGTKMLPSIEEAWSLPIPAELTSRQGGLNTAAGSPGSQTQQQQ
ASKSHQSGEGGQGQMHVSPHPSHTDGQASPAKRKRTASPAKSAVDLWTNHPVQHQIPSWY
LTPQKLQLLDQLRTNRASLKPPQMQILDQLEKQFSLMQQHQHQVRQQAAGQLRPTLPNGP
SLSPNSLPSPHPLSRTSPVSQTTARPPCTAQPMANTPLSSSPLGQLGNPEGGTVGNNRTP
GLPGAGMLPGGGGSNGNVPYLQQNCLPHNCNATSTSNPSTPTSNNASHSSNSTSNVEEAW
KSQQRTNSTQGLHKGPGSHSAGPNGEHPFSSSSSQAAGSGAQILNQVGHSTGPCPASSSS
FSSLPQRAGAPNHLPSLPLHSATTTSVAQTKETTPSGSSSGLATTTGTPLSPGTTAPMQG
LANHIQQGAVTTDSSWSQSQPGSPSPGTLSSDNPQLSALLMGKASNKDVTNHDDNNNNNH
GGVNQGATMDNNIKVNNIHPGVHLGGPKPLSERSVVSSPLSAMSTSTPSPPRCADHHPFT
ANSLISSPSNSGTTGTATTTPQVNGKGLEDSRSPVRVEPTGVSHSRPALAPWSSVSIYPS
SSQVLKACRNLGKNGLSNSSVLLEKCPPPRPPPPPSPSLPKDKLNPPTPSIYLENKRDAF
FPPLHQFCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLSQPTDENW
DLSGTRKMWRCQSSQSHTTIAKYAQYQASSFQESLREENEKKKEQEAEAANAESATRRRK
GPFKHIKFGTNIDLSDERKWKLQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYM
KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVPEHYWGIINDFCEKNNINFLMGSWWPN
LEDLYEADVPVYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAYQYKLAVERY
EWNKLQSVKSIVPMIHLSWNMARNIKVSDSKLFQMIKYCLLRTLKQCQMLRELLQAAGKE
LVWHGRTRDEPAHYCSICEVEVFDLLFVTSESNSRKTYVVHCQDCARRGSSNLDNFVVLE
QYKMDDLTQVYDQFTLAAPLPSSS
NT seq 4575 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcgacgttgctgcctctgctactgctcgaagtctcggc
gctgctggtgatgaggaaaataaaatggcggcgggaaaagcgaatgaaatagaagaggac
tttccgaagctaacatcgcaggagagagaaagcttggtcaaaattgacagttcactgttt
ggatttcagaggcttcatgaagatggcgccagaacgaaggccttactgttaaaggctgta
agctgctatgactctgccatcctgaaggcagaagggaaggtagagccagagatgttctgc
cagctgggccacttcaacctcctcctgcaggactatccaaaagcattatctgcataccag
agatactacagtttacagtcggactactggaagaatgctgcctttttatatggccttggt
atggtttacttccattacaacgcatttcagtggtcccctttctccctgtctaggccagtg
cagcccccctcctcagaggcccaggcaggacagagaagggcgataaaagcgtttcaggaa
gtgctctatgttgaccccagtttctcccgagccacggagatccacatgagactgggcctc
atgtttaaaggcaacaccgattatgagtcaagtctaaagcattttcaactggctttgatt
gactccaacccctgcactttgtccaaagctgaaattcagttccacatcgctcatttatat
gagattcagaagaaattcagagcagcaaaagaagcatatgagagtttactacagacagag
aatcttcctgcacaggtgaaggctactacactgcaacaactgggctggatgcatcacaca
gtggagctgttaggggacaaaggctccaaggacagctatgccatccagtgtctgcagaag
tcgctagaagcagaccccaattctggacagtcctggtacttcctcggcaggtgctactcc
agtattgggaaagtccaggatgccttcatctcctacagacagtccattgacaagtctgag
gccagcgctgacacctggtgctccataggtgtgctgtaccagcagcagaaccagcctatg
gatgcactgcaggcctacatttgtgcagtgcagctggaccacagccacgcagccgcctgg
atggacctgggcacgctctatgaatcctgcgggcagccgcacgacgccatcaagtgttac
atcaacgccacccgcagcaagtcctgcactaacaccgccgccctcacacaccgcattaag
ctgctgcaggctcagttgtgtaaccctcagccaggtagtcttgcgggggggaagggtact
aaaatgcttcctagtattgaggaggcgtggagcctgcccatccccgctgagctcacctcc
agacaggggggcctgaacactgcagcaggcagcccagggtcacagacacagcagcagcag
gcgtctaagtcccaccagagtggtgagggaggccagggccaaatgcacgtctccccccat
cccagccacactgacggtcaggccagccccgccaagagaaaacgcaccgcgagcccggct
aagagtgctgtggacctgtggacaaaccacccggtacaacaccagatccccagctggtac
ctaacaccacagaaattacagctcctggatcagctccggaccaaccgggccagtctgaaa
ccaccacagatgcagattctggaccagctggaaaaacagttctccctcatgcagcagcat
caacatcaggtgagacagcaggcagcaggacagttgcggcccaccctacccaacggcccc
tcgctgtccccaaactccctcccctcccctcaccccctctcccggacttcacccgtcagt
caaaccacagcccgtcccccctgtactgctcagccaatggccaacacacctttatcttca
agtccccttgggcagctaggcaatccagaggggggaactgtgggcaataatcgcactccc
ggtctaccgggtgcagggatgttaccgggaggtggcgggagtaatggaaacgtgccttac
ctacagcagaactgtctacctcacaactgcaatgccactagtaccagtaaccccagtacc
cccaccagcaacaacgccagtcacagcagtaatagtaccagtaatgtagaggaggcctgg
aagagccagcaacgtaccaactccactcaggggcttcacaaaggtccaggttcacattcg
gcaggtcccaatggagaacaccctttctcttcatcctcctcccaggccgctggatccggt
gctcaaattctaaatcaggtcggacattctaccgggccctgccctgcctcctcttcctcc
ttctcctctttgccacagagggccggtgcccccaaccacctcccctccttgcccctccac
tccgccaccactacctcagtggcccaaaccaaagagaccacgccttcaggaagcagcagt
ggattggctaccaccacagggacaccgcttagtcccggtaccactgcccctatgcaggga
ttggctaatcacatccagcagggggcggtgaccacagacagctcgtggagccaatcccag
cccggctctccttctccgggcacgctcagttcagacaatcctcagctctcagccttgctc
atgggaaaagccagtaataaggatgttactaaccacgatgataataataataataatcac
ggtggtgttaatcaaggagccaccatggacaataacatcaaggtcaacaacatccacccg
ggtgtccacctcggaggtcccaaacccctgtcggaacgctctgtggtctcctcgcccctc
tcagccatgtccacctccaccccctcccccccgcgctgcgccgaccaccaccccttcaca
gccaacagccttatcagcagcccgtccaacagcggaaccaccggtaccgctaccactacc
ccacaggtcaacggtaaggggctagaggactctcggagcccagtgagagtagagcccact
ggggtgtctcacagcaggccggccctggccccatggtcctcagtctccatctaccccagc
tccagccaggtgctcaaagcatgcaggaacctggggaagaacggcctgtccaacagcagt
gtcctcctagaaaagtgtccccctcccagaccccctccgcccccctcgccctcactgcca
aaggacaaactcaacccccccacacccagcatctacctggagaataagagggatgcgttc
ttccctccgctccatcagttctgtaccaacccctccaaccctgtcaccgtcatcagagga
ctggccggggcgctcaaactggacctgggtctgttctccactaagaccctggtggaggct
aacccagaccacctggtggaggtacggacccagctgtctcagcccaccgacgagaactgg
gacctaagtggcacaaggaagatgtggcgctgccagagcagccaatcacacaccaccatt
gccaagtatgcccagtaccaggcctcatccttccaggagtcactacgggaggagaatgag
aagaagaaggagcaggaggcagaggcagccaatgcagagagtgcgacacggcggaggaaa
gggcccttcaaacacatcaagtttggcaccaacatcgacctgtctgacgagaggaagtgg
aagctgcagctgcaggagctcagtaaactgccagcatttgccagagtggtgtctgctggc
aacctgctcagccacgtaggacacaccatcctgggcatgaacactgtccagctctacatg
aaggtccctgggagcaggacgccaggtcaccaggagaacaataatttctgttcagtgaac
atcaacattggcccgggggactgtgagtggttcgcagtccccgaacattactggggaatc
atcaacgacttctgtgaaaagaacaacatcaacttcctgatggggtcatggtggcccaac
ctggaggacctgtacgaggcagatgtccccgtctaccgcttcatccagcgtcccggagac
ctggtgtggctcaacacgggcaccgtccactgggtccaggccatcggctggtgcaacaat
atcgcctggaacgtaggacctctcaccgcataccagtataagctggcggtagagcgatat
gagtggaataagctgcaaagcgtgaagtccatcgtccccatgatacacctctcctggaac
atggccaggaacatcaaagtgtccgacagcaagctcttccagatgatcaagtactgtctg
ctgcggacattgaagcagtgtcagatgctgcgggagctgctgcaggcggcaggcaaggag
ctggtgtggcatggcaggaccagggacgagcccgcacattattgcagcatctgcgaggtg
gaggtgtttgacctgctgtttgtaaccagtgagagcaacagcaggaagacatacgtggtg
cactgtcaggactgtgcccgtagggggagctctaacctggacaactttgtggtgctggag
cagtacaagatggacgacctcacacaggtctacgaccagttcacactcgccgctcctctg
ccttcctcctcttga

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