Oncorhynchus kisutch (coho salmon): 109871641
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Entry
109871641 CDS
T09179
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X2
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109871641 (dhx9)
03012 Translation factors [BR:
oki03012
]
109871641 (dhx9)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109871641 (dhx9)
5.6.2.6 RNA 3'-5' helicase
109871641 (dhx9)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109871641 (dhx9)
Translation factors [BR:
oki03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109871641 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
109871641
NCBI-ProteinID:
XP_020318157
Ensembl:
ENSOKIG00005031879
LinkDB
All DBs
Position
LG27:24163332..24183574
Genome browser
AA seq
1312 aa
AA seq
DB search
MRPKSRPDRLVPQCYHVCRLNEKYKSAMADIKNFLYAWCGKKKLTPSYDIRAAGNKNRQK
FLCEVRIEGFNYTGMGNSTNKKDAQANAARDFVNYLVRVGEMNAAEVPALGASGPDFSVP
DCGGGGEGGNVGFGSLPPSGPIPPHLVVKAEQVNAPSAPVPGVTGLGYSGGSGNFSGGGT
NSNAPWDRGANLKDYYSKRDEQEAQATLESEEVDLNAGLHGNWTLENAKARLNQFFQKEK
NQTDYKYSQVGPDHNRSFIAEMQLFVRQLGRKIIAREHGSNKKLAAQSSALSIVRQLYHL
GVIEPYSGVTKKKEGEILEAFEVNVVDELQHQLQSMAQELGVAIPPPPPDPSTPVSLVQG
KMAVFEPSQKQSMAGVVPWSPPQVNWNPWTSSNIDDGPLAFCTPEQISTDLHHELTYQLE
QDQSLQKVIGERDGLPVKKFEEEIMAAVQGSSVVIIRGATGCGKTTQVPQYILDQFIKSG
RASECNIIVTQPRRISAVSVAERVSYERGEDVGKSCGYSVRFESILPRPHASIMFCTVGV
LLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVVQTYPEVRIILMSATIDTTMFRE
YFFNCPVIEVFGRTFPVQEYFLEDCIQMTHFIPPPSDRKRKDKDEEGGDEEANCNVICGP
EYTPETKRSMAQMNEKETPFELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQKHLEMNP
HFGSQRYLILPLHSQIPREEQRRVFEPVPENITKVILSTNIAETSITINDVVYVIDSCKQ
KVKLFTSHNNMTNYATVWGSKTNLEQRKGRAGRVRAGFCFHLCSRARFDKLETHMTPEIF
RTPLHEVALSIKLLRLGAIGHFLSKAIEPPPLDAVIEAEHTLRELDALDTNDELTPLGRI
LAKLPIEPRLGKMMIMGCIFNVGDAVCTISAASCFPEPFINDGKRLGYVHRNFAGTRFSD
HVALLSVFQAWDDVRMGGEDAESRFCEHKRLNMSTLRMTWEAKVQLKEILINSGFPEECL
MTQMFNNVGPDNNLDVVVSLLTYGSYPNVCYHKEKRKILTTEGRNALIHKCSVNCPFSSQ
DMTYPSPFFVFSEKIRTRAISAKGMTLVSPLQLILFASKKITSNGEIIELDDWIKLKIPH
NVAGCIAALRAGMEALVVEVTKDPEYIKQLDPTNERMLNIIRQISKPSAAGLNLMVNNKR
FGDGPRPPKMGRFDGGGGGGYQGGGGGGYRGGGYRGGGGYQGGGGYRGGGGGYRGGGGGY
RGGGGYGGGNRGGGGYGGGNRGGGGYGGGNRGGGGYGGGNRGGGGYGGGQGY
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaaagtccaggcctgaccgtctcgtcccccagtgctatcatgtctgccgtctg
aatgagaaatacaaatccgccatggcggacatcaagaacttcctgtatgcttggtgtggg
aagaagaaactaacacccagctatgacattcgagccgctggaaacaaaaaccgacagaag
tttctgtgtgaggttcgtattgagggattcaactacactggaatgggaaactccaccaat
aagaaggatgcccaggcaaatgctgctagagactttgtcaattatcttgtccgagttgga
gaaatgaatgcagcagaagtcccagcccttggggcaagtggacctgacttcagtgtacct
gactgtggaggagggggggaaggagggaatgttggctttggaagtcttcctccaagtgga
cctatccctcctcacctggttgtgaaagctgagcaagtgaatgcaccttctgcgccagtc
ccaggtgtcactggtttgggttattcgggcggtagcggcaatttttccggaggtggcaca
aacagcaatgctccgtgggatcgtggggccaatctaaaggactactactcaaagagagat
gagcaggaggcacaggcgactctggagtctgaggaggtagatctgaacgcaggactccat
ggcaactggactttagagaacgccaaggcccgtctgaaccaatttttccagaaggagaag
aatcaaacagattacaaatacagccaagttgggcctgaccacaacaggagctttattgct
gagatgcagttatttgtaagacagcttggcagaaagataattgcccgtgagcatggctct
aacaagaagcttgcagcacagtcctctgcgctgtctatcgtccgtcaactttaccatctg
ggtgtcattgagccttattctggcgtcactaagaagaaagagggggaaattttggaagct
tttgaggtgaatgtggtggatgaactgcaacatcagctgcagagtatggcccaagaactg
ggtgttgcaattccacctccaccacctgatccaagtactccagtgtcattggtccaaggg
aagatggctgtgtttgaaccctcccagaaacagagcatggccggggtggtgccctggtcc
cctccgcaagtcaactggaacccctggaccagcagcaatattgacgatggaccactagca
ttttgcaccccagagcaaatcagcactgacctccatcatgagctgacttatcaattggaa
caagatcaaagcctacagaaggtcattggggagcgagacgggcttccagtgaagaaattt
gaggaggagataatggctgccgttcagggcagctcagtggtgatcattcgaggggcgacc
ggctgtggcaaaaccacccaggttcctcagtacatcctggatcagttcatcaagagtggg
agggcgtccgagtgtaacattattgtaacccagccccggcgtatcagtgcagtgtctgtg
gcagagcgtgtttcctacgagagaggagaggatgtcggtaagagctgtgggtacagcgtc
cgctttgaatccatcctcccacgaccccatgccagcatcatgttctgcactgttggtgtg
ttactgcggaagctggaagcaggtattcgcgggatcagccatgtgattgtggatgaaatc
cacgagagagacatcaatactgacttcctcatggtggtgctgagggacgtggtccagacc
tacccagaggtccgcatcatcctcatgtctgccaccatcgacaccaccatgtttagagag
tacttcttcaactgccctgtcatcgaggtgttcggccgcacattcccagtacaagagtac
tttttggaagattgtattcagatgacacatttcattccacctccgagtgatagaaagagg
aaggacaaggatgaggaaggaggagatgaagaggccaactgtaatgtgatatgtgggcca
gagtacaccccagagactaagcgctctatggcccagatgaatgagaaggagactcctttt
gagctggtggaggccctgctgaagtacatcgagaccctccaggtggccggggccgtgctc
gtcttcctgcccggctggaacctcatctactccatgcagaaacacctggagatgaaccca
cactttgggagtcaacggtacctgattctgcctctccactctcagatccccagagaggaa
cagaggagggtatttgagcctgtgcctgaaaacatcaccaaggtgatcttgtcaacaaac
attgcagagaccagtattactatcaatgatgtagtatatgtcatcgactcttgcaagcag
aaagtgaaactgttcacgtctcacaacaacatgaccaactacgccacagtctggggctcc
aagaccaacctggagcagaggaagggtcgcgccggccgcgtccgggctggcttctgcttt
catctgtgtagcagagcacgctttgacaaactggagacccatatgacccctgagatattc
cgtactcctctccacgaggtagccctgagcatcaagctgctgagactaggagccattggc
catttcctttccaaggccatcgagccccctcccctggacgcggttatagaggcagaacac
acactgagagaactggatgctttggacacaaatgacgagttgacgccgcttggtcggatc
cttgcaaagcttccaatcgagccgcgtctggggaagatgatgattatgggctgcatattc
aatgttggagatgcagtgtgcacgatctcagcagcctcctgcttcccagagcccttcatc
aatgatggcaagcgcttgggctatgtgcaccgcaactttgctggcacccgcttctcagac
cacgtggcccttctgtcagtcttccaggcttgggacgatgtgagaatgggaggtgaggat
gcagagtccagattctgtgaacacaagaggctcaacatgtccacactgaggatgacctgg
gaggcaaaagtgcagctgaaggagatcctcatcaactctggcttccctgaggagtgcttg
atgacacagatgttcaataacgttggacccgacaacaaccttgacgtggtcgtctctctc
ctgacatacggctcctatcccaacgtgtgctaccacaaggagaagaggaagattctcacc
actgaggggcgcaatgccctcatccacaaatgctccgtcaactgccccttcagcagccag
gacatgacctacccatcaccgttcttcgtctttagcgaaaagatccggactcgagccatc
tcagccaaaggaatgacactagtcagcccactccagctgatcttgtttgcctccaagaaa
atcacatcaaatggggaaatcattgaactggatgattggatcaaactgaagataccgcat
aatgtggctggctgcatagctgctttgagggctggaatggaggcacttgttgtagaagtc
accaaagaccctgagtacatcaaacagctggatcccacaaacgagcgcatgctcaacatc
atccgtcaaatctccaagccctctgcagctgggcttaacctcatggtcaacaataaacgt
tttggagatggtccacgtcctcccaagatgggcaggtttgacggaggaggcggtggagga
taccagggaggaggcggtggaggatacaggggaggaggttacagaggcggtggaggatac
cagggcggcggcggatacaggggcggtggtggaggttacagaggcggtggtggaggttac
agaggtgggggtggttatggaggcggtaacaggggtgggggtggttatggagggggtaac
aggggtgggggtggttatggagggggtaacaggggtgggggtggttatggaggggggaac
aggggtgggggtggttatggagggggccagggatattag
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