Oncorhynchus kisutch (coho salmon): 109872957
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Entry
109872957 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109872957
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109872957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109872957
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109872957
Intermediate filaments
Intermediate filament-binding proteins
109872957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PAS_8
PH_17
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
109872957
NCBI-ProteinID:
XP_031663278
Ensembl:
ENSOKIG00005029683
UniProt:
A0A8C7IJ20
LinkDB
All DBs
Position
LG28:8458507..8565016
Genome browser
AA seq
2393 aa
AA seq
DB search
MSTISPTDFDSQEIQQQYNDINNRWDLAAETDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKE
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDVIEFDSLKRSNAHYNLQNA
FNTAENKLGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRVGKVLDYA
IEADQLVGNYESLASELLQWIEQTILTLNDRQLANSLSAVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVDAATRKHEAIETDIGAYGER
VAAVEAVARELEAENYHDVRRVLARRDNVLRLWEYLKELLAARRERLNAHRDLQRLLQEM
RSIMDWMGEMKGRLQSQDSGKHLHDVEDLLQTHNLVEADISAQAEGVRGVQGAAQRFTSD
QQVYKPCEPALVGEKVSLLGRAYEELGQLAGERRVRLEDSRRLWQFLWELGEEAAWIREQ
EQILAGGDCGRDLTSALHLLSKHEAFRDEMAARYGPLGNSIAAGQTLVEEGHIGAPECTE
RIRDVRAQWAHLEETSQLREQQLKEAVALHQFQTDANDMEAWILETLRQVSSQEVGHDEF
STQTLARKQREVEEEIQSHRTLIDSLHEQALTLPPVHANSPQVEGRLPAIEQRYHELEAL
SASRRQALEGALALYRMYSEAGACQLWVGEKEQWLDGMQIPTKLEDLEVVQQRFETLEPE
MNNLGTRISDVNQVAQQLLGSDNLSKEQIHQTQDQLNNRWKEFQRLADQRKQALESALNI
QNYHLECNEIQSWMREKTKVIESTESLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLKK
EAETLAEEHPDQAEEIHAHLGEIQEVWQELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAEHLLSQHESIKNEVDNYKEDYEKMRAVGDEVTQGQTDAQY
MFLAQRLQALDTGWHELRRMWENRHSILAQAFDFQSFLREVKQAEGFLNSQEYVLSHTEM
PSSLQGAEEAIKKHEDFLTTMEASEEKITGVVEAGRRLVNDLNANSDKIQEKADSIQERH
QKNREAANELLSKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQALVTEKPELQPVVQQTLESLQSQWEELENTTRTKAQCLF
DANRAELFTQSCSALDVWLKNLSGQLQSDDFGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQSQALALSQEDAGGAVVEVDGQQRRVTDSFSQLQDPLNQRRQQLLASKEAHQFNRDLE
DEILWVKERMPLATSTDHGKDLSSVQLLIKKNQTLQKEIQGHQPRIDDIQTHRRGMSPGQ
EEMDGERRSALEGRLVELRDSWAQLIAETDERHARLVEANRAQQFYTDAAEAEAWMGEQE
LHMMSEEKAKDEQSALVMVKKHQTLEQTLEDYAQPIHQLANSSRTMMTSEHPESERINLR
QAQVDKLYAGLKDLAEERRGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEH
VTMLRDKFREFARDTSTIGQERVDGVNGLADDLIESGHPENASVAEWKDGLNEAWADLLE
LIDTRTQMLSASYELHRFHQDAREALGRVREKKEALPSDLGRDLNTVQHLHRQHTAYEHD
IQALSGQVNQVQDDAARLQKAYAGEKAEEIHRSERSVTEAWEGLLGAGQARRHLLLDTVE
KFRFVNMVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTTCNE
MGHSLINNNHYAADEILEKLDQLQDKRDEISNKWQDKMDHLLIVLEVLQFGRDACVAETW
LAGQEPLVRGAELGSNVDEVESLIKRHEAFEKLAAGWEERFTLLEKLTTLEEQEIQRRRE
EEERARRTPTPPPTEEVAPSEAETHDARTSLDQTTLNQSVSVNGVHSYQDTSQSLSVSSV
SVEKKEKCEPVSKPVSKPKHPLRGSESDSVNGPGRDSGLASSRLDPSATLPSKGDNAGTD
AMEGLLYRKQEMETHAKRAASSFSLSSHRSWQNVYCVLRKGSLGFYKDQKSASGGIPYHG
EVPISLGEAVCEVAHDYKKRKHVFKLRLGDGKEFLFQAKDEPEMASWIHSIHSCIPAGGT
GDRSPGGPRALSRAMTMPPISPSSAEAAGVTMRNKEGKEKDREKRFSFFGKKK
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctctcccaccgacttcgacagccaggagatccagcagcagtacaatgac
atcaacaaccgctgggacctggccgcagagaccgactgggacaatgagaacagctcggca
cgcctctttgagcgctcgcgcatcaaagctctggcagatgagcgcgaagcggtgcagaag
aaaaccttcactaagtgggtgaactctcacctgggccgtgtgacgtgccgcatcggggac
ctgtacactgacctgagagatggacgcatgctcatccgcctgctggaggtgctgtcagga
gaacagctgccgaagcccaccaaggggcgtatgcgtatccactgcctggagaatgtggac
aaggccctgcagttcctcaaggagcagaaggtccacctggagaacatgggctctcacgac
atcgtggacgggaaccaccgcctcaccctgggtctcatctggaccatcatcctccgcttc
cagatccaggacatcagcgtggagactgaggataacaaggagaagaagtctgccaaagag
gccctgcttctctggtgccagatgaagaccgctgggtaccccaacgtcaacgttcacaac
ttcaccaccagctggagagacggcctggcgttcaacgccatcgtgcacaaacacagaccg
gacgtgattgagtttgacagcctgaagcgttccaacgcccactacaacctccagaatgcc
ttcaacacggcagagaataagctgggcctcaccaaactcctggacccagaagatgtcaac
gttgaccagccggatgagaagtccatcatcacctacgtggccacctactaccactacttc
tccaagatgaaggccctggctgtggagggcaagagggttggcaaggtgctggactatgcc
attgaggctgaccagctggttgggaactatgagagcctggcgtcagagctgctgcagtgg
atcgagcagaccattctgaccctgaacgaccggcagctggccaactccctgagcgccgtg
cagaaccagctgcaagccttcaacacctaccgcaccgtggagaaaccccctaagttcaca
gagaaaggcaacctggaggtgctgctgttcaccattcagagcaagatgagagccaacaac
cagaaggtgtacatgcccagagagggcaagctcatctctgacatcaacaaggcgtgggag
cgcctggagaaggcggagcacgagcgggagctggcgctgaggaacgagctgattcgccag
gagaagctggagatgctcgccgctcgtttcgaccgcaaggccgccatgagggagacctgg
ctgagcgagaaccagcggctcgtctctcaggacaactttggcgtggacctgggagcggtg
gacgccgcgactcgtaaacacgaggccatcgagacggacatcggggcgtacggggagcgc
gtggcggccgtggaggcggtggccagggagctggaggcagagaattaccacgacgtgcgc
cgtgtgctggcgaggagggacaacgtgctgcggctgtgggagtatctgaaggagctgtta
gccgctcgcagggagagactcaacgcacaccgtgacctgcagagactgctgcaggagatg
agatccatcatggactggatgggagagatgaagggtcgcctgcagtcccaggacagtggg
aagcacctgcatgatgtggaggacctgctgcagactcacaacctggtggaggcagacatc
tcagcccaggcagagggggtccgtggggtccagggagccgctcagcgcttcacctcggac
caacaggtctacaaaccgtgtgagccggcgctggtgggagagaaggtgtctctgctgggc
cgggcctatgaggagctgggccagctggccggggagcggagggtgcgcctcgaggattca
cggcgcctctggcagttcctgtgggagctgggagaggaggcggcctggatcagagagcag
gagcagatcctggctggaggagactgtggccgcgacctcacctccgccctgcacctactc
agcaagcacgaggccttcagagacgagatggcagcccgctacggccctctgggcaacagc
atcgccgccggacagaccctggtggaggagggacacattggagccccagagtgcactgag
aggatcagggacgtccgcgctcagtgggcccacctggaggagacgtcccagctgagggag
cagcagctgaaggaggcagtggccctgcaccagttccagacggacgccaacgacatggag
gcctggatcctggagacgctgcgccaggtgtccagccaggaggtgggccacgacgagttc
tccacccagaccttggcccgcaagcagagggaggtggaggaggagatccagagccaccgc
accctcatcgactccctgcacgagcaggccctcaccctgcccccggtccatgcaaactcc
cctcaggtagagggccgtctgcctgccatagagcagcgttaccacgagctggaggccctg
tctgcgtcgcggcgtcaggccctggagggggcgctggccctctaccgcatgtacagcgag
gcgggcgcctgccagctgtgggtgggggagaaggaacagtggctggacggcatgcagatc
cccaccaaactggaagacctggaggtggtgcagcagaggttcgagaccctggagcctgag
atgaacaacctggggactcgtatctctgatgtcaaccaggtggctcaacagctgctggga
tcagacaacctcagcaaagagcagatccaccagacacaagaccagctcaacaacaggtgg
aaggagttccagcgtctggcggaccagaggaaacaggccctggagtcggccctcaacatc
cagaactaccacctggagtgtaacgagatccagagctggatgagagagaagaccaaggtg
atcgagtccaccgagagcctgggcaacgacctggctggtgtcatggccctgcagcgcaaa
ctcaccggcatggagagagacctggaggccattcagggtaagttggacgacctgaagaag
gaggcagagacgctggctgaggagcacccggaccaggcagaggagatccatgcccacctg
ggggagatccaggaggtgtggcaggagctcaacgccaccatgaagcgtcgcgaggagtct
ctgggcgaagccagtaagctgcagggattcctccgggacctggatgacttccagtcctgg
ctgtcccgcacgcagaccgccgtggcgtccgaggacatccccacctcgctgccagaggct
gagcacctgctctcccagcacgagagcatcaaaaacgaggtggacaactacaaggaggac
tatgagaagatgcgggcggtgggtgatgaggtgactcagggccagacggacgcccagtac
atgttcctggcccagaggctgcaggcgctggacaccggctggcatgagctgcgccggatg
tgggagaaccgccacagcattctggcccaagccttcgacttccagagcttcctgagggaa
gtcaagcaggctgagggcttcctcaacagccaggagtatgtgctgtcccacactgagatg
ccctccagcctgcagggggcagaggaggccatcaagaagcacgaggacttcctgaccacc
atggaggccagtgaggagaagatcacgggcgtggtggaggccggacgccgcctggtcaac
gaccttaacgccaactctgacaagatccaggagaaggccgactccatccaggagagacat
cagaagaatagggaagctgcaaatgaactcctgtctaaactgaaggacaaccgcgaactt
cagcacttcctgcaggacggacaggagctgactctgtggatcaatgagaagatgctgaca
gctcaggacatgtcgtacgacgaggccaggaacctccacagcaagtggcagaaacaccag
gccttcatggctgagctggcctccaacaaagactggctggataagatcgataaggagggc
caggccctggtgacggagaagccggagctacagcctgtagtccagcaaactctggagagc
ctgcagagccaatgggaagagctagagaacactacgcgcaccaaggctcagtgcctcttc
gatgccaacagggcagagctcttcacccagagctgctctgctctggacgtgtggctgaag
aacctgtcagggcagcttcagagcgacgacttcggcaaggacctgacctccgtcaacatc
ctgctcaagaagcaccagatgctggagcaccagatggaggtgcgtgagaaggaggtgcag
tcgctgcagtcccaggcgctggcgctgtcccaggaagatgctggtggggccgtggtggag
gtggacggccagcagagacgtgtcactgacagcttctcccagctccaggaccccctcaac
cagaggcggcagcaactgctggcttccaaggaggcccaccagttcaacagagacctggag
gatgagattctgtgggtgaaggagaggatgcccctggccacatccacagaccatgggaag
gacctgtccagtgtgcagctgctcatcaagaagaaccagactttgcagaaggagatccag
ggccaccagccccgtattgatgacatccagacccaccgcagggggatgtccccagggcag
gaggagatggacggggagaggcggtctgctctggaggggcgtctggtggagctccgggac
tcctgggcccagctcatcgctgagacggacgagcgccacgcccggctggtggaggctaac
cgcgcccagcagttctacaccgacgctgccgaggccgaggcctggatgggagagcaggag
ctacacatgatgtcagaggagaaggccaaggatgagcagagcgctctggtgatggtgaag
aagcaccagacgttagaacagaccttggaggactacgcccagcccatccaccagctggcc
aacagcagccgcaccatgatgaccagcgaacacccagagagcgagcgtatcaacctacgg
caagcccaggtggacaagctgtacgcagggctgaaggacctggctgaggagcgtcgtggg
cgtctccaggagaggctgaggctgacccagctgaagagagaggtggacgacctggagcag
tggatcgctgagagggaggtggtggccggatcccatgagctgggacaggactacgaacat
gtcaccatgctgcgggacaagttccgcgagtttgctcgggacaccagcaccatcggccag
gagcgcgtggacggcgttaacgggctggccgatgacctcatcgagtcgggtcaccctgag
aacgccagcgtggcagagtggaaggacgggctgaacgaggcgtgggccgacctgctggag
ctgatcgacacgcgcacccagatgctatccgcctcctacgagctgcaccgcttccaccag
gacgcccgcgaggcgctggggagggtccgggagaagaaggaggcgctgccctctgacctg
ggccgtgacctcaacaccgtccagcacctccaccgacagcacaccgcctacgagcacgac
atccaggccctcagcggacaggtgaaccaggtgcaggacgacgcggcgcggctgcagaag
gcctacgccggggagaaggccgaggagatccaccggagcgaacgctctgtcactgaggcc
tgggagggtctgctgggggccggccaggctcgccgtcacctcctgctggacaccgtggag
aagttccgcttcgtcaacatggtgcgtgacctcatgttgtggatggacggggtcaacctg
cagatcgacgcccacgacagccccagggacgtgtcctctgcagggttggtcatagccaac
catcaggacatcaagtctgagatcgagacccgggcagacagcttcaccacctgcaatgag
atgggacactctctcatcaacaacaaccactatgcagctgatgagatcctggagaaactg
gaccagctccaggataagagggatgagatcagcaacaagtggcaggacaagatggaccac
ctcctgatagttctggaggtgctgcagtttggccgggatgcgtgcgtggcagagacgtgg
ctggcaggccaggagcccctggtgcggggggccgagctgggctctaacgtggacgaggtg
gagagcctgatcaaacgccacgaggccttcgagaagctggccgccggctgggaggaacgc
ttcaccctgctggagaaactcaccacgctggaggagcaggagatccagaggaggagggag
gaggaggagagggcgaggcgaacccccacaccacccccgacagaagaggtggccccgtct
gaggccgaaacacatgatgccaggaccagcctggaccagaccacactcaaccagtcagta
tcagtcaatggagtccacagctaccaggacacctcccagtcgttatcagtatcatcagtg
tcagtggaaaagaaagagaagtgtgaacctgtctctaaacctgtgtctaagccaaagcat
ccgctgcgcggttctgagtccgactctgtgaatggtccggggagggacagcgggctggcg
tcttcacgcctggacccgtctgccacgctacccagcaagggagataacgctggcacagac
gccatggaaggcctgctctaccgcaagcaggagatggagacccacgccaagagggcagct
agcagcttctctctctcttcccataggtcctggcagaatgtctactgcgttctgcgtaag
ggcagccttggcttctacaaggaccagaagagcgcctctggcgggatcccctaccacgga
gaagtccccatcagcctgggagaggctgtgtgtgaggtggcgcacgactacaagaagagg
aaacacgtcttcaagttacggctaggggatggtaaggagttcctgttccaagctaaagat
gagccggagatggcctcgtggatccactccattcatagctgcatcccagcaggggggaca
ggagaccgctcccccggaggccccagggccctgagtcgagccatgactatgccccccatc
tcccctagctcagcagaggctgcaggggtcaccatgcgcaacaaggagggcaaggagaag
gaccgtgaaaagaggttcagcttctttggcaagaagaaataa
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integrated database retrieval system
