Oncorhynchus kisutch (coho salmon): 109873172
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Entry
109873172 CDS
T09179
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109873172
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109873172
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109873172
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109873172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
109873172
NCBI-ProteinID:
XP_031663631
Ensembl:
ENSOKIG00005047086
LinkDB
All DBs
Position
LG28:190418..230335
Genome browser
AA seq
1035 aa
AA seq
DB search
MNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLLS
HRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKYH
QKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPRSGLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKLVAYFKYNSSRPREEWEMWHPTLI
AEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIVPSPKSVWYLCVWTHNRLCGRDHPSPDNPRKHENLKEFTERHADNLIQNQHYQE
VIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSSS
EATQQDEANEEEGAGQAQGQSRDQGAKGVSFSTSIAERKSKDSGFSVSALFKSMSGAEGA
VDNKPKCNGLRFSSSPPPSAALTRSSGRLQRFSKSKRDSIRQLGLLFSRMNGHVPEPRSP
PPRMHQPTYSISGGLLRQPTTWPDIQIPHNPPVTHSLFHLGVNLNELPHAPPQALPLGSP
QQANGSDSLLLRPAGHSLPPPGHSLHCASSITASSSRAVLLGSSEDMFEGWIGPCDELDS
SEGGAEQEDSITTQL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgtgaccgc
atcccattgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtacctg
acggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggagatc
tactacaacatcaacgtgaactgcctggacccactggggcgcagcgcgctgctcatcgcc
atcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtgggc
gacgcactgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctgtcc
catcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatacccagttctca
gagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgagatc
atcaagctgctggtccagcgcaaggtgaccatcccccggccccaccagatccgctgcgac
tgcgtggcctgtgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgcctc
aacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagaccccatc
ctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaacgagttc
cgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctggac
caggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagtgag
gagctagacccacaggactgccgtgacctggccaagctcaaactagctatcaagtaccac
cagaaagagtttgtgtcccagccaaactgtcagcagcttctggccaccctgtggtacgac
ggtttccccgggtggcgcagacgccactgggcggtcaagctggtcacctgcttcaccatc
ggcctgctcttccctatcttctccctggtctacctgctggcccctaggagtggcctgggc
ctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgactttt
cttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccagggc
ccgccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgggct
gagataaaggagatgtgggacggcggcttcactgagtacgtccatgactggtggaatctg
atggacttcgccatgaactctctctacttggccaccatctcactcaaactagttgcttac
ttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctgatc
gccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctgttc
acagccaactcccacctggggcctctgcagatctctctgggacgcatgttgctggacatc
ctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaaccag
ctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatccgc
tgtgagaagcagaacaacgccttctctacgctgtttgagacgttacagtccctgttctgg
tcgatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttcaca
gagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctgctc
aacatgctcatcgccatgatgaacaactcctatcagctcatcgctgatcatgcggacatt
gaatggaagtttgcccgcaccaagctgtggatgagttattttgacgagggaggaactctc
cctccgcccttcaacatcgtccccagccccaagtcagtgtggtacctgtgtgtgtggacg
cacaaccgcctgtgtggacgggaccatcccagtcctgacaacccgaggaaacacgagaac
ctaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcaggag
gtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaagacagac
gagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgctac
gaggtgttagacctgttgggggacaggaaacctccgcggaggacctactcatccagcagt
gaggctacccagcaggacgaggccaacgaggaagaaggggctggacaggcccagggtcag
tccagggaccaaggggctaagggggtatccttcagcacgtctatcgctgagaggaagagc
aaggactctgggttcagcgtctccgccctctttaagtccatgtcaggggcagagggggca
gtagacaacaaaccaaagtgcaacgggctcaggttctcctcctcccccccgccctctgct
gcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaaaagagactccatc
agacagctgggcctgctcttctcccgcatgaacggacacgtcccagagcccagatcccct
cctcccaggatgcaccagcccacctacagcatctcaggcggtctgcttcggcagcccaca
acctggccagacatccagatcccccacaatcccccggttacacacagcctgttccacctg
ggggtgaacctgaacgagctaccacatgcccctccccaggccctgccattggggtcaccc
cagcaggctaacggaagtgacagtctgctcctgcgacccgcgggccactccttaccaccg
ccaggccactccctacactgtgcttccagcatcacggcctccagctcccgggctgtcctc
ctgggctctagtgaggacatgtttgagggctggataggaccttgtgacgagctggactcc
tctgaggggggggctgagcaggaggactccatcacaacacagctttag
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