Oncorhynchus kisutch (coho salmon): 109873949 Help Entry 109873949         CDS       T09179                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04010   MAPK signaling pathway oki04137   Mitophagy - animal oki04141   Protein processing in endoplasmic reticulum oki04210   Apoptosis oki04217   Necroptosis oki04621   NOD-like receptor signaling pathway oki04622   RIG-I-like receptor signaling pathway oki04920   Adipocytokine signaling pathway oki05132   Salmonella infection oki05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     109873949  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     109873949  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     109873949   09143 Cell growth and death    04210 Apoptosis     109873949    04217 Necroptosis     109873949  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     109873949    04622 RIG-I-like receptor signaling pathway     109873949   09152 Endocrine system    04920 Adipocytokine signaling pathway     109873949  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109873949   09171 Infectious disease: bacterial    05132 Salmonella infection     109873949  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109873949    04121 Ubiquitin system [BR:oki04121]     109873949 Enzymes [BR:oki01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109873949 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      109873949 Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     109873949 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 Sina_ZnF SlyX zf-C3HC4_4 DUF4795 Motif Other DBs NCBI-GeneID:  109873949 NCBI-ProteinID:  XP_020321239 Ensembl:  ENSOKIG00005048246 LinkDB All DBs Position LG29:complement(6666144..6682682) Genome browser AA seq 595 aa AA seqDB search MATQEPSPPSSMESNKPGFPKKILANKLEDKHLCNCCHNLLRRPFQAQCGHRFCSYCFTM TVRDGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLSAVCINEGCTWKGNIKE YELSHEEKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLDLHRSLRELEVRVSQISTTSIGPPVQ GVTSSSSSLGLPGPPTTALPLPPPPAPVPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA ELGRRCTDLEVKVGTFENVVCVLNREVERFTTTMEAGNRQHRLDQDKIEALSNKVRQLER TVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSSREHIIDA FRPDITSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDIIFIKAIVDLTGL NT seq 1788 nt NT seq  +upstreamnt  +downstreamnt atggccacgcaagaaccatcccctccatcgtccatggagagcaacaaacccggcttcccc aagaagatcctggccaataagctggaggataagcacctgtgtaactgctgtcacaacctg ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcactatg actgtcagagatggacctcagaaatgcaatgcttgtatcaaagaggacatttttgaagag cccacgtcaattctaaaacaaggctgtgcttttcctgacaacgcagctcgaagagaggtc gaaaacctctctgctgtctgcatcaacgaaggttgcacttggaaaggcaatattaaagaa tacgagttgagccacgaagagaagtgtgagttcatgatcatcccctgcccttcctgtaaa gagcggatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaacc ctcaactgcaagtactgcaaggagccattccatttcaaaaacatcaaggcccacgacgag atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatccccagggag aagtatgtggaccacattaagttctgcagcaaattcagaacgccgtgcagattccatgtt gttgggtgtgatatgtcagtggagaaggagaggatccacgaccacgagagggcctgcgct tacgaacacctcaacctgctgctacactacattatgggcatgaaggtgagcatggagggc ctgcagccgcagggactggagctagccggacacaagctcctggacctccaccgttccctc agggagctggaggtccgcgtctcccagatcagcaccacctcgatcgggcctcccgtgcag ggggtcacatcctcctcttcctccttaggtctcccggggcctcctaccacggctcttcct ctgcctccacctcccgccccggtcccaaccctgaccgtgtccacctccttcacccccctg cctagctcggtgggggcggccctggagctgcagctccacagtgagaagaccaaggtggcg gagctgggacgcaggtgcactgacctggaggtgaaggtggggacgtttgagaatgtggtg tgtgtgttgaaccgagaggtagaacgcttcaccaccaccatggaggcaggtaacagacag catcgactggaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg acggtgggactgaaggacctgacggtagcggagatggagggcaggctgagagagatgtcg gccaccacgttcgacggcgtcttcgtctggaggatctctgacttcaccaagaagagacag gacgccatcgctggccgagcccccgccatgttctcaccagcattctacaccagtaaatac ggctataagatgtgtctgcggatctacctgaatggggacgggacagggcgtggcagtcac ctttctcttttctttgtggtgatgagaggactgagtgatgctctgctaaaatggcccttt aaccagaaggtgactctgatgctgctggaccagagtagcagggagcacatcatcgacgcc ttccggcctgacatcacttcctcctccttccagaggcctgtgagcgagatgaacatcgcc agcggctgcccgctgttctgcccgctctcaaagcttgacgccaagaactcctacatccgc gacgacataatcttcatcaaggccattgtggatctcacaggcctttag

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