Oncorhynchus kisutch (coho salmon): 109874390
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Entry
109874390 CDS
T09179
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
oki04210
Apoptosis
oki04217
Necroptosis
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04920
Adipocytokine signaling pathway
oki05132
Salmonella infection
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109874390
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109874390
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109874390
09143 Cell growth and death
04210 Apoptosis
109874390
04217 Necroptosis
109874390
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109874390
04622 RIG-I-like receptor signaling pathway
109874390
09152 Endocrine system
04920 Adipocytokine signaling pathway
109874390
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109874390
09171 Infectious disease: bacterial
05132 Salmonella infection
109874390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109874390
04121 Ubiquitin system [BR:
oki04121
]
109874390
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109874390
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109874390
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
109874390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-RING_4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109874390
NCBI-ProteinID:
XP_031665262
Ensembl:
ENSOKIG00005025565
LinkDB
All DBs
Position
LG29:complement(18697843..18724954)
Genome browser
AA seq
526 aa
AA seq
DB search
MARISLPSLDSSLPGIPQSVLAVSMEAKYQCQQCHQVLRKPVQAQCGHRFCVHCFKLLTS
SGPKPCEACRQEEIYEEPQSILNSNEAFPDNAAGREIASLPAKCISEGCSWTGCIKEYEA
QHEGKCEYERVPCETCQVLILRSEKERHNERECEARTLNCKYCKVSFNFKEIKAHDEICQ
KFPMQCKDCGKKKIPREKFLDHSRSCAKSKTACPFSEVGCKVVIDNGKHSDHEQTSVMEH
MRLILAMMSLVRLQRPEAPGLGEWQEDSGLGLYRAPEDGATATAATDGGGAAASGQTFGL
DHKVRALENIVCVLNREVERSSLTLEAFSRQHRLDQDKIENLGNKVRQLERTLTMRDLQL
AETDQTLRELQFCTFDGVFVWKIADFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLY
LNGDGTGRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTS
FQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatatctctaccctctttggactcctcccttccagggataccccagagtgtc
ctggctgtttccatggaagctaagtaccaatgtcagcagtgtcaccaggtcctgaggaag
ccagtccaggctcagtgtggacatcgtttctgtgtccattgtttcaaactgctcaccagc
tccggcccaaagccctgtgaagcctgtcgacaggaggagatatatgaggagccacagtcc
attctcaatagtaatgaggcttttccagacaatgcagctggtagagaaatcgctagcctg
cctgccaaatgtatcagtgagggatgctcttggactggttgcataaaagaatatgaggca
caacacgagggcaagtgtgagtatgagcgagtaccatgtgaaacctgccaggtccttatc
ctgcgcagtgaaaaagagaggcataatgagagagaatgtgaagcaaggacattgaactgc
aagtactgcaaagtctccttcaacttcaaggaaatcaaggctcatgatgaaatctgccag
aagtttcccatgcagtgcaaggactgtggaaagaaaaagatcccacgagaaaagtttcta
gatcacagcagatcctgtgccaagtctaagactgcatgtccgttcagtgaggtcggctgc
aaggttgtgattgataatgggaagcacagtgaccacgagcagactagtgtcatggagcac
atgcgtctgatcctggcgatgatgtctctggtgcggcttcagcgtccagaggccccaggg
ctgggggagtggcaggaggactctgggctgggcctgtaccgcgctcccgaagatggagcc
acagctactgcagccacagatgggggaggagccgctgcctctggacagacctttggtctt
gaccacaaggtgagagcactggagaatatagtgtgtgtattgaacagggaagtagagagg
agttctctcactttagaggccttctcacggcaacatcgtctagaccaagacaagattgag
aacctcggcaacaaggtacgtcaactagagcgtactctcaccatgcgggacctacaactg
gctgagacagaccagactctgagagaactccagttttgcacctttgatggtgtctttgtc
tggaagatcgccgacttctcacggcgccgccaggatgctgtggctgggcgaacacccgct
atgttctcaccagcattctactcaagtaaatatggctataagatgtgtctgagactgtat
ctgaatggggacggaacgggtcgagggactcacctttctcttttcttcgtggtgatgagg
ggcaagtgtgacgctctgctcaaatggcccttcagtcagaaggtgacactgatgctgctg
gatcagaataacagggagcatatcattgatgccttccggcctgatgtaagctccacctct
ttccagcggccaatcagtgagatgaacatagccagtggctgcccactcttctgcccattg
gctaaactggcaggcaagagctcctaccttagggatgacaccattttcatcaaggccatt
gtagacctcacaggcctgtag
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integrated database retrieval system