Oncorhynchus kisutch (coho salmon): 109874667
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Entry
109874667 CDS
T09179
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04217
Necroptosis
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109874667
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109874667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109874667
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
109874667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109874667
NCBI-ProteinID:
XP_020322270
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Position
LG30:27237768..27253918
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AA seq
312 aa
AA seq
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MSSLREAHRVAANSSPHPLDDRQMHTAAVALEQRSTDSLPLTEELRLELARAVEAGDSQA
AAQHASALAHQKVALTIQLSEKSYAEGEIRLAVAVEDISSSCCVTVKVFPHMTVAALKQQ
VFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQRDGDMAYLYLISARHAHLTRQLFQQDA
LLTPPLPTSNGSTSQDWRGYSTLPSRLSHNSQGSTGREADRLGMSEIREALNLETLQNNN
KPDQPCKASKAQTEWVCPSCTFINNPSRPGCEICSTARPDSGAPPHTTGERKKSGAGGDW
CIDQLTASQPLP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccctaagagaggcacacagagttgctgcaaatagttccccacatcctctggat
gaccgacagatgcacaccgcagcagtagctctagaacagcgcagcacagactccttacca
ctcactgaggagctgcgcctggagcttgcccgggcggtcgaagcaggcgacagccaggct
gctgctcagcatgcatctgctctggctcaccagaaggtggcgctcaccatccaactgtct
gagaagagttacgcagaaggagagatacgtttggctgtggcagtggaggacatttcctct
tcctgttgcgtcacagtgaaagttttcccacacatgaccgtcgcagcactcaagcagcag
gtttttctggagtatggcttccaccctcgcgtgcagcgctgggtgatagggcagtgtttg
tgcacagaacccaggtccctggcctcgtatggagtccagagggatggggacatggcctac
ctctacctgatctcagcccgccatgcccacctcacccgccagctgttccagcaggacgcc
ctcctcaccccacctctgcctaccagcaacgggtctacgtcccaggactggaggggctac
agcaccctgccctccaggctcagccacaactcccaggggagcaccggacgtgaggctgac
aggctgggtatgagcgagatcagagaggccctcaacttggagactctgcagaacaacaat
aaacctgatcaaccctgcaaagccagtaaagcacagacagaatgggtttgtccctcctgc
acctttatcaacaatccttcccgaccaggctgtgagatctgtagtacagccagacctgac
tcgggagcaccgcctcatacaacaggagaaaggaagaagagtggagcagggggagattgg
tgcattgatcagttgactgcctcgcaacctttaccatag
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