Oncorhynchus kisutch (coho salmon): 109875107
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Entry
109875107 CDS
T09179
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X14
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04081
Hormone signaling
oki04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109875107
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109875107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875107
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
109875107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
109875107
NCBI-ProteinID:
XP_020322887
Ensembl:
ENSOKIG00005044139
LinkDB
All DBs
Position
LG30:complement(34225264..34259131)
Genome browser
AA seq
1026 aa
AA seq
DB search
MNDDCTDNHHAEAAFSISRFLNYTSSGKMVSIETSPNSSPLAEWVGCLDKRPAERSAEDV
DIILTRLTGFKAFQRFHPSLLLQICSCAFYEYLGKGITLFRQGDIGTSWYAVLSGSLDVK
VSETANHQDAVTICTLGIGTAFGESILDNTPRHATIVSRETSELLRIEQREFKSLWEKYR
QCMAGLLAPPYGAMETGSNNDRLTDKDSLGSDPLNLMNKILNKVPSEKLQRGGKVMRNAI
LSRAPHMIRDRKYHLKTYRQCCVGTELVDWLVQQSTCVHTRSHAVGMWQVLLEEGVLNHV
DQELGFQDKYLFYRFLDDEEEHTPLPSEEEKRESEEELPETILFLAQMGPDALLCMILRK
PPGQRTGDDLEIIYDELLHIKALSHLSNTVKRELASVLIFESHAKAGTVLFNQGEEGTSW
YIIQKGSVNVVIYGKGVVCTLHEGDDFGKLALVTDSPRAASIVLREDNCHFLRVDKEDFN
RILRDVEANTVRLKEYEQAVLVLEKSPRASSPGNIRYTVLSGTPEKILDHFLETMRMDTH
HSDPDPAVDDFVLMHCVFMPNSQFCQLLMAHYHAVAPPGSEQERLEYAVTCKRRVLNLAL
RWAAVHTHHLQEEPAALIFLEELYGSVSNDSRILRALKDFVPDLEKVVKLHSEEAKVKKQ
KVLTQFSNGDEKLVKTQPIRNYDDILLKVYCSDHTYTTIRVAVAATGSEVTSAVADKLAS
NDDLLLVHLSSAGEKQMLKPNDVSVFSSLSINGRMFACPRDQLNALTPLPDQEGPSAGSM
SSFELMSSKDLAYQMTLYDWELFSCVHEHELLYNTFGRQSFRRTTANLDLFLRRFNQVQL
WVVTEVCLCGQLSKRVQLLKKFIKIAAHCREFKNLNSFFAIIMGMSNPAVSRLTQTWEKL
PSKFKKFYAEFESMMDPSRNHRAYRLTVTKIEPPIIPFMPLLLKDMTFSHEGNKTFIDNM
VNFEKMRVIANTIRAVRHCRSQPFNPEVCQPNKNHAEVRGYVRKLCVIDKQRTLTTLSYR
LEPRRT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgactgcacggataaccaccacgctgaagccgccttcagcatctcccggttt
ctcaattacacatcctctggaaagatggtctctatagaaacatcacccaactcgtctcct
ttggctgaatgggtcggctgtctggataaaaggcctgcggagcgttcagcagaggatgtg
gatattattctgaccagacttacagggtttaaagccttccagaggttccacccctccctg
ctgctgcagatctgctcctgtgcattctacgaatacctggggaaaggcatcaccttgttc
cgccagggtgacatagggaccagctggtatgctgttctgtctggctctctggacgtcaag
gtgtcagaaactgccaaccaccaggatgctgtcactatctgcacgctgggaatcgggacg
gcgtttggagagtcaattctggataatactcctcgccacgccactatcgtcagcagagag
accagcgaactgctccgcatcgaacagagagagttcaagagtctatgggagaagtaccgt
cagtgtatggctggacttctggcccctccctatggtgccatggaaactggatccaacaat
gacaggctgacagacaaagacagtctaggttcagatcctctcaacttaatgaacaagata
ctcaacaaggttccatcagagaagctgcagcgaggggggaaggtgatgcggaacgccatc
ctctccagagctcctcacatgatcagagacaggaagtaccacctcaagacttacaggcag
tgttgtgtaggtacagagctggtagactggctggtgcagcagagtacctgtgtacatact
cgctctcacgctgtggggatgtggcaggttctgctggaggagggagtcctgaaccatgtg
gaccaggagctaggtttccaggacaagtacctgttctatcgtttccttgacgatgaggag
gagcacaccccattgcctagcgaggaggagaagagggagagtgaggaagagctgcctgag
acaatcctcttcctcgcccagatgggacctgatgccctgctgtgcatgatcctccgcaaa
ccgcctggtcagaggacgggtgatgatctagagatcatctatgatgagctgcttcacatc
aaggccttatcccacctctccaacactgtgaagagggagctggcaagtgttctcatcttc
gagtctcacgccaaagcaggaaccgtgttgtttaaccagggtgaggagggaacatcctgg
tacatcatccagaagggctctgtcaatgtggtcatctacggcaagggtgtggtgtgtacc
ctgcacgagggggatgactttggaaagctggcgttggtgactgactctcctcgagctgcc
tccatcgtcctcagagaagacaactgtcacttcctccgagtggacaaagaagacttcaac
aggatactcagggacgtggaggcaaatacagtgcgtttgaaggaatatgagcaggctgtt
ctggtcttggagaagagtcccagagcctccagtccgggaaatatcaggtacactgtgttg
tctggaacccctgagaagatccttgaccacttcctggagactatgaggatggatacacac
cactctgacccagatcctgcggtagatgactttgtcctcatgcactgtgtcttcatgcct
aacagccagttctgccagctactcatggcacactaccatgcggtggctcccccgggctcg
gagcaggagaggttggagtacgctgtgacctgtaagagacgagtcctcaatctggccctg
cgctgggctgcagtacacacacatcacttacaggaggagccagcagcactcatattcctg
gaggagctgtatgggagtgtgtccaatgactcacggatcctcagagctctgaaagacttt
gtacctgacttggagaaggttgtcaaactacattcagaagaggccaaagttaaaaagcag
aaggtccttacacagttcagcaacggagacgagaaactagtgaagacacaacccatcagg
aactatgacgacatcctgttgaaggtgtactgcagtgaccacacctacaccaccatccgg
gttgccgtagcggccacagggagtgaggtgaccagcgctgtggccgacaaacttgcctca
aacgacgacctgctattggtccacctcagctccgcaggcgagaagcagatgctgaagccc
aatgatgtgtcagtattctcctctctgagcatcaatgggcgtatgttcgcctgtccccgg
gaccagctcaatgctctgacccctctcccagaccaggaagggccctcagctgggtccatg
tccagttttgagctgatgagttctaaagacctggcctatcagatgaccctgtacgactgg
gaactcttcagctgtgttcacgagcatgagttgttgtacaacacgtttggtcgtcagagc
ttcaggagaaccactgccaacctggacctgtttctacgcaggttcaaccaggtgcagctg
tgggtggtgacggaggtatgtctgtgtggtcagcttagcaaacgggttcagctgctcaag
aagttcatcaaaatcgctgctcactgtcgggagtttaaaaacctgaactcgttctttgcc
atcatcatgggtatgagcaaccctgcagtcagccgactcacccaaacctgggagaaactc
cctagcaagttcaagaagttctatgctgagtttgagagcatgatggacccgtccaggaac
caccgggcataccggctgaccgtcaccaaaatagagccgccaatcatccccttcatgccc
ctcctcctcaaagacatgacttttagtcacgagggcaacaagacattcatagacaacatg
gtcaactttgagaagatgcgggtgatcgcaaacaccatccgggcggtgagacactgcagg
agtcagccgttcaaccctgaggtgtgtcagcccaataagaaccatgctgaggtgaggggt
tatgtcaggaagctgtgtgtgattgacaaacaacggaccctgacaacactctcctatagg
ctagagccccgcaggacctga
DBGET
integrated database retrieval system
