Oncorhynchus kisutch (coho salmon): 109877755 Help Entry 109877755         CDS       T09179                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04010   MAPK signaling pathway oki04120   Ubiquitin mediated proteolysis oki04140   Autophagy - animal oki04144   Endocytosis oki04620   Toll-like receptor signaling pathway oki04621   NOD-like receptor signaling pathway oki04622   RIG-I-like receptor signaling pathway oki05132   Salmonella infection oki05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     109877755 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     109877755 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     109877755 (traf6)    04140 Autophagy - animal     109877755 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     109877755 (traf6)    04621 NOD-like receptor signaling pathway     109877755 (traf6)    04622 RIG-I-like receptor signaling pathway     109877755 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109877755 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     109877755 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109877755 (traf6)    04121 Ubiquitin system [BR:oki04121]     109877755 (traf6) Enzymes [BR:oki01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109877755 (traf6) Membrane trafficking [BR:oki04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     109877755 (traf6) Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     109877755 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 Sina_ZnF U-box TRAF3_RING DM zf-TRAF_2 RING_XB3-XBAT31 zf-RING_11 zf-rbx1 Phage_GP20 Motif Other DBs NCBI-GeneID:  109877755 NCBI-ProteinID:  XP_020325543 Ensembl:  ENSOKIG00005034012 UniProt:  A0A8C7J1D1 LinkDB All DBs Position Unknown AA seq 551 aa AA seqDB search MSCFESDKSSLENDEACCGGAAASQLSNCALAMLEKESSDSALSPTESTPTSLQGGAPLQ GYDVEFDPPLESKYECPICLMALRAAVQTPCGHRFCRSCIEKSIRDTGQRCPVDNEVLRE DQLFPDNFAKREILSLTVRCTNVGCTDKMELRRLDGHVTKCEFATVPCPLCQDAVWKSQL EMHQSQHCQRRPVSCPDCVESFVYEDSKIHESLCPFANVVCQYCGMELIRDQLESHYDTD CPKAPIACTFSTFGCREMMQRNDLAQHMQEFTQMHMRCMAEYLHRHSLTGYTQPPSSEDR GAAAAELGAHPGASSSGAPCQCCGELQTMRETTQQLEGRLVRQDHQLRELSIQAGLVAEL RRKVTSLEENLKELEAKQCQGVYVWPLEGFSGYLRTQAAGQPVVVHSPGFYTGRPGYKLC LRLHLQTPSAQRCSNYISLFVHTMQGEFDGQLSWPFQGTIRLAVLDQGPEGQHHVEVMET KPDLQAFQRPTIQRNPKGFGYVTFLHLMELPQRGFVHDDTLLVRCEVTPRFDTALRREGA ALQPRGPEASL NT seq 1656 nt NT seq  +upstreamnt  +downstreamnt atgtcctgctttgagagtgataagagcagcctggagaatgatgaagcgtgttgtggtggg gcggccgcgtcacagctgtccaactgtgcgctggccatgctggagaaagagagcagcgac tctgcgctgagccccacggagagtacccccaccagcctacagggcggcgccccactgcaa ggctacgacgtggagttcgaccctccgctggagagcaagtacgagtgccccatctgcctc atggccctgagggcagccgtgcagacgccgtgcggccatcgcttctgccgtagctgcatt gagaagtccatccgtgatacagggcagaggtgtccagtggataacgaggtactacgggaa gaccagctgtttccagataactttgccaagcgggagatcctctccctaacggtgcgctgc accaacgtaggctgcactgacaaaatggagcttcgccgcctggatggccatgttacgaaa tgtgagtttgccaccgtgccttgtccgctgtgccaggacgcggtgtggaagagccagctg gagatgcaccaaagccaacactgccagcggagacctgtgtcctgtcccgactgtgtagag agctttgtttatgaggacagcaagattcatgagtcgctgtgtccctttgccaacgtggtg tgtcagtactgcggtatggagctcatcagagaccagttggaatctcactatgacacagac tgtccgaaggctccgattgcctgtaccttcagcacttttggatgtcgagagatgatgcag cgcaatgacctggcgcagcacatgcaggagttcactcagatgcacatgcgctgcatggct gagtacctgcacaggcacagccttaccgggtacacccagccaccttcttctgaggaccga ggggctgccgccgcagagctgggggcacacccaggagctagcagcagtggcgccccctgc cagtgctgcggggaactgcagaccatgcgggagaccacccagcagctggagggacgacta gtacggcaggaccaccagctacgtgagctgagcattcaggcggggctggtggcggagctc cgtcgcaaggtcacctcgctggaggagaacctaaaggagctggaggccaagcagtgccag ggtgtgtacgtgtggcccttggagggcttctcgggctacctacgtacccaggctgccgga cagcctgttgtggtgcatagcccgggcttctacacgggccggccgggctacaagctgtgt ctgcgcctccacctccaaacgccctcggcacagcgctgctccaactacatctcactgttc gttcacaccatgcagggtgaatttgatgggcagctgtcgtggcccttccaaggcaccatc cggctggccgtgctggaccaggggcctgagggccagcaccatgtggaggtgatggagacc aagcccgacctgcaggcattccagaggcccaccatccagaggaaccccaagggctttggc tacgtcacctttctgcacttgatggagctaccacagcgggggtttgtgcacgacgacacg ctgctggtgcgctgcgaggtgacgccgcgcttcgacactgccctaaggcgcgagggagcg gccttgcagcccagagggcccgaggcctcgctgtga

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