Oncorhynchus kisutch (coho salmon): 109878407
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Entry
109878407 CDS
T09179
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109878407
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109878407
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
109878407
NCBI-ProteinID:
XP_031645845
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Position
LG15:complement(27729918..27732594)
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AA seq
818 aa
AA seq
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MGYRDWRWLALWWHNFFLLWSTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIFDRKL
RVASEAGKQYFSVDAGKGELVVNERIDRETVCGQSASCVLPLQVVIENPLQLYRIEVEIR
DINDNSPNFITNELTLKIAESVVVGRRFSLESAEDPDVGSNALKYYTISKDECFSLKVRD
LSNGRKAPELVLEKPLDREKEAVHQLLLTALDGGSPVRSGTSQITITVLDVNDNFPVFEK
ALYKVSIHENSPKGTFMVKLKAIDVDDVQNGEVKYSFGERTPNAVLSIFDIDSDTGEMFL
KGELDFENAATYEIDINAKDNGTPEMEGQCSVRVEVVDVNDNPPEIILTSKPSPLREDAP
SGTVVALISARDQDSGKNGNVTLQLPRDYPFNLKPSFSNNYALVTSGVLDRESFSEYKIE
ITATDSGSPPLTTKKTIPVSIIDVNDNSPKFTQSSYNVYLKENGLPGSMLSSVSASDLDF
GDNAKISYSILDSKVQGVSVSSYVYMNSDNGSIYSMHSFDYETLKVFQILVQAKDHGSPS
LSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRSSKAGHLVTKVTAVDADSGHNA
WISYKLTEATDASLFNVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSSTVTVAI
LVEDGLQEPILDLRQKAPEPGKKSGRITLYLILSLASVSMLSLVTFVMLAVKCVRNSRSS
GSCCMRLDDLDGYNNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSEFSDF
TFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSSEL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggataccgagactggagatggctggctctttggtggcataatttttttctcttgtgg
agtacaatagacggacagactcgctacaccatcccggaggaactgaaacagggctctgtg
gtaggaaatctagccaaagatctgggtttgggactatctgagatttttgaccgtaaactg
cgtgtcgcctctgaggctggtaagcagtacttcagtgtggatgcggggaagggcgagctg
gtcgtcaatgagagaatagatagagagactgtatgtggacaaagcgccagctgcgtttta
cctctgcaggttgttattgagaacccgttacagttgtatcgaattgaggtggaaatacga
gacataaatgacaattcaccaaattttataacaaatgaactcacgctgaaaatagcggaa
tctgttgttgtaggcaggcgattttctttggagagcgcagaggacccagatgtgggaagt
aacgcactcaagtattacacaattagtaaagacgagtgctttagtttaaaggtaagagac
cttagtaatggaagaaaagcgccagagttagtattagaaaaacctctagatcgagagaaa
gaagctgtccatcagctactattaactgcactagatggggggagtcctgtcagatccggg
acgtcacagataactattacagtgcttgatgtaaacgacaattttccagtgtttgaaaag
gcattgtacaaggtttccatacacgaaaatagtccaaaaggtacttttatggtcaaactt
aaagcgatagacgtagacgatgttcaaaatggggaggtgaagtattcatttggtgagcgc
acccccaatgctgtgctttctatatttgacattgattcagacacaggggagatgtttttg
aaaggagaattagatttcgaaaatgctgctacatatgaaattgatatcaatgcaaaagat
aacggcactccggaaatggagggacaatgtagtgttcgggtggaggtagttgacgtaaac
gacaaccctcctgaaataattttgacctccaagccgagtccgttgcgcgaagacgcaccc
agtggcacagtagtggctttgattagtgcccgagaccaagactccgggaaaaacggtaac
gtaacgttacaactcccgcgagactatccttttaatctgaaaccgtcattttctaataat
tacgcactggtcaccagtggtgttttagaccgagagagcttctcagagtataaaattgag
ataacagccactgattcgggctcccctcccctgactaccaagaaaactatacctgtcagt
atcattgatgtcaacgacaactcccctaaattcactcagtcctcctataatgtctattta
aaagagaatggactaccaggctccatgctctcctcagtatctgcatctgacctggatttc
ggggataatgccaaaatctcttactccatcctagactccaaagtgcagggcgtgtctgtc
tcctcctatgtttatatgaactctgataacggcagcatctacagcatgcactcgtttgac
tatgagacactgaaggtgtttcagattctggtgcaggcaaaggaccacggctctccgtct
ctgagcagcaacgccactgtccatgtttttatcctggaccagaacgacaatgcccccgct
gttatttacccctccgctgccctgggctcgctctctcaccagaagatgccccgctcttct
aaagcaggccacctggttactaaggtaacggccgtggacgcagattcaggtcataacgcc
tggatctcgtataaactgacggaggccacagatgcgtctctgttcaatgtcaatctttac
acaggggaagtaaggactaaacgcgctgtgtccgagcaggacgactcctctcagaggctg
cttatagagataaaggacgacggggaaccggtacagtcttccacggtcacagtggccata
ctggtagaggacgggctccaagaacccatcttggacctccgacagaaagcgccagagccc
ggcaagaaaagcgggagaatcaccctgtatttgatcctctctctggcctcggtgtccatg
ctgtctctggtgacttttgtcatgttagcggtcaagtgcgttagaaacagcaggagcagc
ggtagttgctgcatgagactggacgatttggacggctacaataaccccaatagaaacctg
cagatccagctcaacactgacgggcctattaagtacgtagaggtcctgggaggggacatg
ttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagagttcagtgatttc
accttcgttaagcccagcagcaccactgactttaaggagatgatcaacgttctagacgcg
tctttacccgacagcgcctggacctttgagagccagcaggtgagcagtgaactgtag
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