KEGG   Oncorhynchus kisutch (coho salmon): 109878407
Entry
109878407         CDS       T09179                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109878407
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   109878407
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3
Other DBs
NCBI-GeneID: 109878407
NCBI-ProteinID: XP_031645845
LinkDB
Position
LG15:complement(27729918..27732594)
AA seq 818 aa
MGYRDWRWLALWWHNFFLLWSTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIFDRKL
RVASEAGKQYFSVDAGKGELVVNERIDRETVCGQSASCVLPLQVVIENPLQLYRIEVEIR
DINDNSPNFITNELTLKIAESVVVGRRFSLESAEDPDVGSNALKYYTISKDECFSLKVRD
LSNGRKAPELVLEKPLDREKEAVHQLLLTALDGGSPVRSGTSQITITVLDVNDNFPVFEK
ALYKVSIHENSPKGTFMVKLKAIDVDDVQNGEVKYSFGERTPNAVLSIFDIDSDTGEMFL
KGELDFENAATYEIDINAKDNGTPEMEGQCSVRVEVVDVNDNPPEIILTSKPSPLREDAP
SGTVVALISARDQDSGKNGNVTLQLPRDYPFNLKPSFSNNYALVTSGVLDRESFSEYKIE
ITATDSGSPPLTTKKTIPVSIIDVNDNSPKFTQSSYNVYLKENGLPGSMLSSVSASDLDF
GDNAKISYSILDSKVQGVSVSSYVYMNSDNGSIYSMHSFDYETLKVFQILVQAKDHGSPS
LSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRSSKAGHLVTKVTAVDADSGHNA
WISYKLTEATDASLFNVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSSTVTVAI
LVEDGLQEPILDLRQKAPEPGKKSGRITLYLILSLASVSMLSLVTFVMLAVKCVRNSRSS
GSCCMRLDDLDGYNNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSEFSDF
TFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSSEL
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgggataccgagactggagatggctggctctttggtggcataatttttttctcttgtgg
agtacaatagacggacagactcgctacaccatcccggaggaactgaaacagggctctgtg
gtaggaaatctagccaaagatctgggtttgggactatctgagatttttgaccgtaaactg
cgtgtcgcctctgaggctggtaagcagtacttcagtgtggatgcggggaagggcgagctg
gtcgtcaatgagagaatagatagagagactgtatgtggacaaagcgccagctgcgtttta
cctctgcaggttgttattgagaacccgttacagttgtatcgaattgaggtggaaatacga
gacataaatgacaattcaccaaattttataacaaatgaactcacgctgaaaatagcggaa
tctgttgttgtaggcaggcgattttctttggagagcgcagaggacccagatgtgggaagt
aacgcactcaagtattacacaattagtaaagacgagtgctttagtttaaaggtaagagac
cttagtaatggaagaaaagcgccagagttagtattagaaaaacctctagatcgagagaaa
gaagctgtccatcagctactattaactgcactagatggggggagtcctgtcagatccggg
acgtcacagataactattacagtgcttgatgtaaacgacaattttccagtgtttgaaaag
gcattgtacaaggtttccatacacgaaaatagtccaaaaggtacttttatggtcaaactt
aaagcgatagacgtagacgatgttcaaaatggggaggtgaagtattcatttggtgagcgc
acccccaatgctgtgctttctatatttgacattgattcagacacaggggagatgtttttg
aaaggagaattagatttcgaaaatgctgctacatatgaaattgatatcaatgcaaaagat
aacggcactccggaaatggagggacaatgtagtgttcgggtggaggtagttgacgtaaac
gacaaccctcctgaaataattttgacctccaagccgagtccgttgcgcgaagacgcaccc
agtggcacagtagtggctttgattagtgcccgagaccaagactccgggaaaaacggtaac
gtaacgttacaactcccgcgagactatccttttaatctgaaaccgtcattttctaataat
tacgcactggtcaccagtggtgttttagaccgagagagcttctcagagtataaaattgag
ataacagccactgattcgggctcccctcccctgactaccaagaaaactatacctgtcagt
atcattgatgtcaacgacaactcccctaaattcactcagtcctcctataatgtctattta
aaagagaatggactaccaggctccatgctctcctcagtatctgcatctgacctggatttc
ggggataatgccaaaatctcttactccatcctagactccaaagtgcagggcgtgtctgtc
tcctcctatgtttatatgaactctgataacggcagcatctacagcatgcactcgtttgac
tatgagacactgaaggtgtttcagattctggtgcaggcaaaggaccacggctctccgtct
ctgagcagcaacgccactgtccatgtttttatcctggaccagaacgacaatgcccccgct
gttatttacccctccgctgccctgggctcgctctctcaccagaagatgccccgctcttct
aaagcaggccacctggttactaaggtaacggccgtggacgcagattcaggtcataacgcc
tggatctcgtataaactgacggaggccacagatgcgtctctgttcaatgtcaatctttac
acaggggaagtaaggactaaacgcgctgtgtccgagcaggacgactcctctcagaggctg
cttatagagataaaggacgacggggaaccggtacagtcttccacggtcacagtggccata
ctggtagaggacgggctccaagaacccatcttggacctccgacagaaagcgccagagccc
ggcaagaaaagcgggagaatcaccctgtatttgatcctctctctggcctcggtgtccatg
ctgtctctggtgacttttgtcatgttagcggtcaagtgcgttagaaacagcaggagcagc
ggtagttgctgcatgagactggacgatttggacggctacaataaccccaatagaaacctg
cagatccagctcaacactgacgggcctattaagtacgtagaggtcctgggaggggacatg
ttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagagttcagtgatttc
accttcgttaagcccagcagcaccactgactttaaggagatgatcaacgttctagacgcg
tctttacccgacagcgcctggacctttgagagccagcaggtgagcagtgaactgtag

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