Oncorhynchus kisutch (coho salmon): 109878706 Help Entry 109878706         CDS       T09179                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04115   p53 signaling pathway oki04145   Phagosome oki04148   Efferocytosis oki04350   TGF-beta signaling pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109878706   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109878706  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109878706    04148 Efferocytosis     109878706   09143 Cell growth and death    04115 p53 signaling pathway     109878706   09144 Cellular community - eukaryotes    04510 Focal adhesion     109878706   09142 Cell motility    04820 Cytoskeleton in muscle cells     109878706  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109878706   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109878706 Membrane trafficking [BR:oki04131]  Endocytosis   Phagocytosis    Opsonins     109878706 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109878706 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN cEGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  109878706 NCBI-ProteinID:  XP_031692682 Ensembl:  ENSOKIG00005031526 LinkDB All DBs Position LG12:complement(9016529..9038604) Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAESRDDNSVYDLFELVHVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPEVPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPITARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNSVLTDRI IVMDNPINGSSPAIRTDYTGHKSKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRAGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVSDGECCPRCGTLSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPVNGNWGPWSLWDTCSSTCGGGAQTRKRLCNDPAPKYGGKECQGDSKAT QLCNRNACPVDGCLSNPCFPGTKCTSVPDGTWSCGKCPTGYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPARYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKRIMKDSGSV YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatctttctgctattgatgctttggacctgcgagagcgtacgagtt gcagagagccgagacgacaatagcgtgtacgacctattcgagctggtccacgtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgaggtccccgagagctccttcagggacctcattgattcc atccacgcggagaggggattccttctcctcctcaacttcaagcagttcaagcggaccagg ggctccctcctgacggtggaaaagcgtgacggatccggagccgtgttcgagatcgtctcc aacgggaaagcgaacaccctggatgtggttttctctacagtgaataagcaacaggtggtg tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacagcggaactggacgct cccatccagagcatcctcactcaggagactcccatcacggcgcgtctcagaatcgggaaa ggagcggtgaaggaccggttcatgggggtgctccaaaacgttcgttttgtctttggaacc actttagaagcgatactgcgcaacaaaggatgccaaaactctgttctgactgatagaatc atcgttatggacaaccccatcaatgggtccagccctgccattaggactgactacactggc cacaaaagtaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggaattgaaggggctgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggatgagaacaagctgttgatgaacagagcggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgcactgagtgc acttgtcagaactctgccaccgtatgccgcaagatctcctgcccactgatcccctgtgcc aacgccaccgtgtctgatggagagtgttgcccgcgctgtggaacactgagtgactatgcg gaggacggctggtccctctggtctgaatggacacactgttccgtgtcttgtgggcggggc attcagcagaggggccgttcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggcgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt attcgcctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagaggga agacagaccgagaagtgcaccaagtcaccctgccccgtcaacggtaactggggaccctgg tcgctatgggatacctgctcttccacctgtgggggaggagcccagacacgtaaacgtctc tgcaacgaccccgcccccaaatatggtggcaaggagtgccagggtgactccaaggccact cagctgtgcaacaggaacgcctgtcccgtcgatggttgtctgtctaacccctgctttcct gggaccaagtgcaccagcgttcccgatggaacatggagttgtgggaaatgccccactggt tactctggtgacggcatcaagtgcaaggacattgacgagtgtaaagaggttcctgacgct tgcttcgtgttcaacggagtccaccgctgtgagaacactgaccctggttacaactgtctg ccctgtcccgcacgctactctggacctcagcccttcggcaggggagtggaggaggccacc gccaagaaacaggtgtgtacaccacgtaacccctgcttggatgggagccacgactgcaac aagaacgcacgctgtaactacctgggacactttgccgatcccatgtaccgctgtgagtgt aagcctggctatgccggaaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaagaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcgtgt gacaacgatgatgacaacgatggcattcctgacgacagggataactgcccgttcgtgtac aaccccaggcaatatgactatgacagagatgatgttggagatcgttgtgataactgtcct tacaacagcaaccctgaccagactgacacagacaacaacggggaaggagacgcctgctct gtggacattgatggagatggtattctgaatgagaaagacaactgcccgtacgtctacaac gtggaccagcgagacactgacctggatggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagacaagtgtgacagc aaccaggacatcgatgaggacggccaccagaataacctggacaactgcccctacatcccc aacgctaaccaggccgaccatgacaaagacggcaagggagacgcctgcgaccacgatgac gacaacgacgggatccctgatgagaaagacaactgcagactggccttcaaccctgaccag ctcgactctgatggtgacggtcgcggagatgtttgcaaagatgattttgaccaagacaac gtccctgacatctacgacgtgtgtccggagaactttgacatcagcgaaacggacttcagg aagttccagatggttcccctggaccccaagggaacgtcccagattgaccccaactgggtg gtcagacatcaaggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagcga gatgatgactacgccggctttgtgttcggctaccagtccagctccaggttctacgtggtg atgtggaagcagatcacacagacctactggaacaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactctactactggacctggagagcacctcaggaac gctctctggcacacgggcaacaccccaggacaggtgaggactctgtggcatgaccctaag aatgttggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaggatcatgaaggattccgggagcgta tacgacaagacgtacgcaggcggaagactaggtctctttgtcttctcgcaagagatggta tacttctcagacctcaagtatgaatgcagagatgcataa

DBGET integrated database retrieval system