Oncorhynchus kisutch (coho salmon): 109878778
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Entry
109878778 CDS
T09179
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109878778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109878778
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109878778
Membrane trafficking [BR:
oki04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
109878778
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109878778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
CARD
UPA-FIIND
Motif
Other DBs
NCBI-GeneID:
109878778
NCBI-ProteinID:
XP_031676471
Ensembl:
ENSOKIG00005042328
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MLVLVQDSTHWLQIEPLTSTVQGVTMFRHRTPKGSYECTVSGLRWLCERDVILKYHFRNW
EPYSQLLKGMQYTQGGPLLDITMELGELEEVHLPHFVCLGTNPSLRNEMKILHVEEHGVS
LEEVYEVTRFHAKILHPKFSAISLILRLLSWNVDVHCELMLYLTVIKDKLIPRLYLFPSD
PGQIQAVEQQEIKFQGSKRFPNTRPERSFKLKSSFRLNIPCSTSINPPRIHLIHRDTTPS
FFRAVVKMTGIDIAMELFGDDETTAWKEIVPTDEYISDTRSTSAVLGAGRPPERSLTGST
KLQLRSVRTEFVKRVSRPVLNELLDGLLQHTVINQEEMESVKVIAERAEKARDIIDMVLR
KGTESCSRMINLLREIDPYLWSMLQINSVGVPT
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtccttgttcaggactccacacactggcttcagattgaacccttgacttccact
gtccagggagtgacaatgttcaggcacaggacacccaaagggagttatgagtgcacagtg
tctgggctccgctggctgtgtgagagagatgtcattctgaagtatcacttcaggaactgg
gaaccctacagtcaacttctgaaaggcatgcagtacacacaaggtggtccattgctggac
atcactatggagttaggtgaactggaggaagttcatctgccacactttgtctgtttaggg
accaacccttccctgaggaatgagatgaagattcttcatgtagaggaacatggagtgtct
ttagaggaagtgtatgaggtcaccagattccatgctaagattctccatcccaagttctca
gctatctctctgatactgagattactgtcttggaacgtagatgtccactgtgagctgatg
ctctatctgacagtgataaaggataaactaattccacgcctatacctgtttcccagtgac
cccggccagatacaggctgtggaacaacaggaaataaagtttcaaggatctaaaaggttt
cccaacacaagaccagagcggtctttcaaactgaagagttccttcagactgaacattccc
tgttctacctccatcaatccaccgaggattcatctcatacatagagacaccacaccaagc
tttttcagggcggttgtgaaaatgacagggattgacattgcgatggaattatttggtgat
gatgagacgacagcgtggaaagaaatagtaccaacagatgaatacatctctgacacccgt
tcaacaagtgctgtgttgggggcagggcgtccgcctgagagaagtctgactggttctaca
aaactgcagctgcgttctgtacggacagagtttgtgaaacgagtgtcaagacctgtcctg
aatgaactgctggacggactcctgcaacacacagtcatcaaccaggaggaaatggagtca
gtgaaggtgatcgctgagagggcagagaaggcacgtgacatcatcgacatggtgttgaga
aaaggaactgagtcgtgttccaggatgatcaaccttcttcgggagattgacccctatctt
tggtcaatgcttcagattaacagtgttggggtaccaacctaa
DBGET
integrated database retrieval system
