Oncorhynchus kisutch (coho salmon): 109879194
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Entry
109879194 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
oki04210
Apoptosis
oki04217
Necroptosis
oki04510
Focal adhesion
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109879194
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109879194
04217 Necroptosis
109879194
09144 Cellular community - eukaryotes
04510 Focal adhesion
109879194
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109879194
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109879194
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109879194
03029 Mitochondrial biogenesis [BR:
oki03029
]
109879194
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109879194
Peptidases and inhibitors [BR:
oki01002
]
Peptidase inhibitors
Family I32: IAP family
109879194
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109879194
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109879194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
109879194
NCBI-ProteinID:
XP_020326971
Ensembl:
ENSOKIG00005041434
LinkDB
All DBs
Position
LG15:complement(13447146..13460424)
Genome browser
AA seq
467 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDESTYPMVPHMVSEDSRFNTLGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWEPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREEEVGETRPRPGPRVHMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAKH
YPGCNFLLTEKGQEFVSSVQLQGPGRNNAASSHLNGCSSHGTEVLRSAMAQRAVEMGLEP
ALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPFEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCAAITQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatctggagtcagaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggag
aggctggcccgtgctgggttttacttcacaggacaggctgacaaggtgcgctgctttagc
tgccacaaaactgtagagaattggtgtggaggggacacacccgcggagaggcacgcggag
gtctcccctaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaacgaagacgctgaggacatggagttccgc
ctgagaacgggagaggtggtggatgagtccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttaggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagtgaccgggtgcagtgcttctgc
tgtggagggatgctggggggctgggagcctggggacacggcgtggggggagcactccaaa
cacttcccctactgcttcttcatactggggcatgatgtggggaacctcccctctcaggcg
gggagagaggaggaggtaggggagaccaggccacgcccgggtcctcgggtccacatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccatgagagg
ctggccagagcaggcttctacaacacaggagctccagatcgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagccggatgagaatccctgggaggagcatgccaaacac
tatccggggtgtaattttctgctgacagagaaaggacaggagttcgtcagcagtgttcag
ttacaaggtcctggcaggaacaatgctgcttcaagtcacctgaatggatgttcaagtcac
ggaacagaggtgctgaggtcagccatggcccagagggcggtagagatgggtctggagcca
gccctggtagagaggaccatactggagaggatacgcagagctgggacaggctactccacc
ctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgca
gagaaccatgatgaggatccctttgagaagctacggaagctgcagagggagaaacagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtgcagccatcacacaa
aagatcaagacatacatctcctaa
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