Oncorhynchus kisutch (coho salmon): 109879558
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Entry
109879558 CDS
T09179
Name
(RefSeq) actin, cytoplasmic 1 isoform X1
KO
K05692
actin beta/gamma 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
oki04145
Phagosome
oki04210
Apoptosis
oki04510
Focal adhesion
oki04517
IgSF CAM signaling
oki04518
Integrin signaling
oki04519
Cadherin signaling
oki04520
Adherens junction
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki04814
Motor proteins
oki04820
Cytoskeleton in muscle cells
oki05100
Bacterial invasion of epithelial cells
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109879558
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109879558
04518 Integrin signaling
109879558
04519 Cadherin signaling
109879558
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109879558
09143 Cell growth and death
04210 Apoptosis
109879558
09144 Cellular community - eukaryotes
04510 Focal adhesion
109879558
04520 Adherens junction
109879558
04530 Tight junction
109879558
09142 Cell motility
04814 Motor proteins
109879558
04820 Cytoskeleton in muscle cells
109879558
04810 Regulation of actin cytoskeleton
109879558
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109879558
05100 Bacterial invasion of epithelial cells
109879558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109879558
03019 Messenger RNA biogenesis [BR:
oki03019
]
109879558
03036 Chromosome and associated proteins [BR:
oki03036
]
109879558
03029 Mitochondrial biogenesis [BR:
oki03029
]
109879558
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109879558
04147 Exosome [BR:
oki04147
]
109879558
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109879558
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
109879558
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
109879558
NuA4 complex
109879558
Chromatin remodeling factors
BAF complex
109879558
PBAF complex
109879558
GBAF(ncBAF) complex
109879558
SWR1 complex
109879558
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
109879558
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
109879558
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109879558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
109879558
NCBI-ProteinID:
XP_020327314
Ensembl:
ENSOKIG00005041311
UniProt:
A0A8C7JWG1
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagatgacgcgcctcgggctgtcttcccctccatcgttgggcgtcccaggcat
cagggagtgatggttgggatgggccagaaagacagctacgtgggagacgaggctcagagc
aagagaggtatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaaaatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcactgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacaccccggccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtgcccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacagactacctgatgaagatcctgacggagcgaggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcctcctcttcctctctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagaggttccgctgcccagaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccacctacaac
tccatcatgaagtgtgatgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccccggcatcgctgacaggatgcagaaggagatcacctctctg
gccccctccaccatgaagatcaagatcatcgcccccccagagcgtaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccaacagatgtggatcagcaagcag
gagtacgacgagtctggtccctccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system