KEGG   Oncorhynchus kisutch (coho salmon): 109879560
Entry
109879560         CDS       T09179                                 
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03082  ATP-dependent chromatin remodeling
oki04145  Phagosome
oki04210  Apoptosis
oki04510  Focal adhesion
oki04520  Adherens junction
oki04530  Tight junction
oki04810  Regulation of actin cytoskeleton
oki04814  Motor proteins
oki04820  Cytoskeleton in muscle cells
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109879560
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109879560
  09143 Cell growth and death
   04210 Apoptosis
    109879560
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109879560
   04520 Adherens junction
    109879560
   04530 Tight junction
    109879560
  09142 Cell motility
   04814 Motor proteins
    109879560
   04820 Cytoskeleton in muscle cells
    109879560
   04810 Regulation of actin cytoskeleton
    109879560
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109879560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109879560
   03019 Messenger RNA biogenesis [BR:oki03019]
    109879560
   03036 Chromosome and associated proteins [BR:oki03036]
    109879560
   03029 Mitochondrial biogenesis [BR:oki03029]
    109879560
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109879560
   04147 Exosome [BR:oki04147]
    109879560
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109879560
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     109879560
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     109879560
    NuA4 complex
     109879560
  Chromatin remodeling factors
   BAF complex
    109879560
   PBAF complex
    109879560
   GBAF(ncBAF) complex
    109879560
   SWR1 complex
    109879560
Mitochondrial biogenesis [BR:oki03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    109879560
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     109879560
Exosome [BR:oki04147]
 Exosomal proteins
  Proteins found in most exosomes
   109879560
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 109879560
NCBI-ProteinID: XP_031677953
Ensembl: ENSOKIG00005026310
LinkDB
Position
Unknown
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgccctggtcgttgataacggctccggtatgtgcaaggccggt
tttgcaggagatgatgctcctcgggctgtgttcccctccatcgtgggtcgccccagacat
cagggagtgatggttgggatgggccagaaggacagctacgtgggagacgaggctcagagc
aagaggggcatcctgactctgaagtaccccatcgagcatggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtacccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcctcctcttcctctctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagaggttccgctgcccagaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccaccttcaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccctggcatcgctgacaggatgcagaaggagatcacctctctg
gccccctccaccatgaagatcaagatcatcgcccctccagagcggaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccaacagatgtggattagcaagcag
gagtatgatgagtctggtccctccatcgtccaccgtaaatgcttctaa

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