Oncorhynchus kisutch (coho salmon): 109879560
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Entry
109879560 CDS
T09179
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
oki04145
Phagosome
oki04210
Apoptosis
oki04510
Focal adhesion
oki04520
Adherens junction
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki04814
Motor proteins
oki04820
Cytoskeleton in muscle cells
oki05100
Bacterial invasion of epithelial cells
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109879560
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109879560
09143 Cell growth and death
04210 Apoptosis
109879560
09144 Cellular community - eukaryotes
04510 Focal adhesion
109879560
04520 Adherens junction
109879560
04530 Tight junction
109879560
09142 Cell motility
04814 Motor proteins
109879560
04820 Cytoskeleton in muscle cells
109879560
04810 Regulation of actin cytoskeleton
109879560
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109879560
05100 Bacterial invasion of epithelial cells
109879560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109879560
03019 Messenger RNA biogenesis [BR:
oki03019
]
109879560
03036 Chromosome and associated proteins [BR:
oki03036
]
109879560
03029 Mitochondrial biogenesis [BR:
oki03029
]
109879560
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109879560
04147 Exosome [BR:
oki04147
]
109879560
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109879560
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
109879560
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
109879560
NuA4 complex
109879560
Chromatin remodeling factors
BAF complex
109879560
PBAF complex
109879560
GBAF(ncBAF) complex
109879560
SWR1 complex
109879560
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
109879560
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
109879560
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109879560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
109879560
NCBI-ProteinID:
XP_031677953
Ensembl:
ENSOKIG00005026310
UniProt:
A0A8C7MP71
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgccctggtcgttgataacggctccggtatgtgcaaggccggt
tttgcaggagatgatgctcctcgggctgtgttcccctccatcgtgggtcgccccagacat
cagggagtgatggttgggatgggccagaaggacagctacgtgggagacgaggctcagagc
aagaggggcatcctgactctgaagtaccccatcgagcatggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtacccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacggactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcctcctcttcctctctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagaggttccgctgcccagaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccaccttcaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccctggcatcgctgacaggatgcagaaggagatcacctctctg
gccccctccaccatgaagatcaagatcatcgcccctccagagcggaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccaacagatgtggattagcaagcag
gagtatgatgagtctggtccctccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system