Oncorhynchus kisutch (coho salmon): 109882167
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Entry
109882167 CDS
T09179
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04060
Cytokine-cytokine receptor interaction
oki04150
mTOR signaling pathway
oki04210
Apoptosis
oki04217
Necroptosis
oki04350
TGF-beta signaling pathway
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04625
C-type lectin receptor signaling pathway
oki04920
Adipocytokine signaling pathway
oki05132
Salmonella infection
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109882167
04350 TGF-beta signaling pathway
109882167
04150 mTOR signaling pathway
109882167
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109882167
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109882167
04217 Necroptosis
109882167
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109882167
04621 NOD-like receptor signaling pathway
109882167
04622 RIG-I-like receptor signaling pathway
109882167
04625 C-type lectin receptor signaling pathway
109882167
09152 Endocrine system
04920 Adipocytokine signaling pathway
109882167
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109882167
09171 Infectious disease: bacterial
05132 Salmonella infection
109882167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oki04052
]
109882167
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109882167
Cytokines and neuropeptides [BR:
oki04052
]
Cytokines
Tumor necrosis fators
109882167
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Cytokines
109882167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
109882167
NCBI-ProteinID:
XP_020329850
Ensembl:
ENSOKIG00005030901
UniProt:
A0A8C7IE28
LinkDB
All DBs
Position
LG17:7800918..7803946
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AA seq
244 aa
AA seq
DB search
MAGDCSRVMLDVESGPVYPATTVTLVREKSTHRWRLCGALLAMALCVSAALFVTWHAKRQ
DQVEEVDELQHTLRQLSVNRKAAIHLEGEYNCSGKYKTTVEWTDNEGQGISQGGLNLNNN
EIVIPQPGLYFVYSQVSFRVSCKADPKHPNNQEMVHLSNTVTRWSPSYGTEDNKEYLMLL
NSVRTVCKKSSNSEASEGQWYNAVYVGAVFNLEKGDRLRTVTENRLLPHLESGAGKNFFG
VFAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgattgcagcagagtgatgttagacgtggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggagaagtccacacaccggtggaggctgtgtggtgccctg
ctggccatggcattgtgtgtctcagctgcactcttcgttacctggcacgccaagagacaa
gatcaggtcgaggaagttgatgaacttcagcatacactgagacaactctctgtaaacaga
aaggctgccattcatctagaaggtgagtacaactgcagtggaaaatacaagaccacagtg
gagtggacagacaatgagggccagggaatctcacaggggggtcttaacctcaacaacaac
gagattgtgatcccccagccgggcctatacttcgtctacagccaggtctctttccgcgtc
agctgcaaggccgaccccaagcaccctaacaaccaggagatggttcacctgagtaacacg
gtcacgcgctggtccccaagctacggcaccgaagacaacaaggagtacctgatgctgctc
aactctgtacgcaccgtgtgtaagaagtcttccaacagcgaggcgagcgaaggacagtgg
tataatgcagtgtatgtgggagccgtgttcaacctggagaagggagacaggctccggaca
gtcacagagaacaggcttctgccgcatctggagagtggcgctgggaaaaacttctttggc
gtgttcgccttgtga
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integrated database retrieval system