KEGG   Oncorhynchus kisutch (coho salmon): 109882167
Entry
109882167         CDS       T09179                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04010  MAPK signaling pathway
oki04060  Cytokine-cytokine receptor interaction
oki04150  mTOR signaling pathway
oki04210  Apoptosis
oki04217  Necroptosis
oki04350  TGF-beta signaling pathway
oki04620  Toll-like receptor signaling pathway
oki04621  NOD-like receptor signaling pathway
oki04622  RIG-I-like receptor signaling pathway
oki04625  C-type lectin receptor signaling pathway
oki04920  Adipocytokine signaling pathway
oki05132  Salmonella infection
oki05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109882167
   04350 TGF-beta signaling pathway
    109882167
   04150 mTOR signaling pathway
    109882167
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109882167
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109882167
   04217 Necroptosis
    109882167
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109882167
   04621 NOD-like receptor signaling pathway
    109882167
   04622 RIG-I-like receptor signaling pathway
    109882167
   04625 C-type lectin receptor signaling pathway
    109882167
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    109882167
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109882167
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109882167
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oki04052]
    109882167
   00536 Glycosaminoglycan binding proteins [BR:oki00536]
    109882167
Cytokines and neuropeptides [BR:oki04052]
 Cytokines
  Tumor necrosis fators
   109882167
Glycosaminoglycan binding proteins [BR:oki00536]
 Heparan sulfate / Heparin
  Cytokines
   109882167
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 109882167
NCBI-ProteinID: XP_020329850
Ensembl: ENSOKIG00005030901
UniProt: A0A8C7IE28
LinkDB
Position
LG17:7800918..7803946
AA seq 244 aa
MAGDCSRVMLDVESGPVYPATTVTLVREKSTHRWRLCGALLAMALCVSAALFVTWHAKRQ
DQVEEVDELQHTLRQLSVNRKAAIHLEGEYNCSGKYKTTVEWTDNEGQGISQGGLNLNNN
EIVIPQPGLYFVYSQVSFRVSCKADPKHPNNQEMVHLSNTVTRWSPSYGTEDNKEYLMLL
NSVRTVCKKSSNSEASEGQWYNAVYVGAVFNLEKGDRLRTVTENRLLPHLESGAGKNFFG
VFAL
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcaggtgattgcagcagagtgatgttagacgtggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggagaagtccacacaccggtggaggctgtgtggtgccctg
ctggccatggcattgtgtgtctcagctgcactcttcgttacctggcacgccaagagacaa
gatcaggtcgaggaagttgatgaacttcagcatacactgagacaactctctgtaaacaga
aaggctgccattcatctagaaggtgagtacaactgcagtggaaaatacaagaccacagtg
gagtggacagacaatgagggccagggaatctcacaggggggtcttaacctcaacaacaac
gagattgtgatcccccagccgggcctatacttcgtctacagccaggtctctttccgcgtc
agctgcaaggccgaccccaagcaccctaacaaccaggagatggttcacctgagtaacacg
gtcacgcgctggtccccaagctacggcaccgaagacaacaaggagtacctgatgctgctc
aactctgtacgcaccgtgtgtaagaagtcttccaacagcgaggcgagcgaaggacagtgg
tataatgcagtgtatgtgggagccgtgttcaacctggagaagggagacaggctccggaca
gtcacagagaacaggcttctgccgcatctggagagtggcgctgggaaaaacttctttggc
gtgttcgccttgtga

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