Oncorhynchus kisutch (coho salmon): 109882539 Help Entry 109882539         CDS       T09179                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04010   MAPK signaling pathway oki04137   Mitophagy - animal oki04141   Protein processing in endoplasmic reticulum oki04210   Apoptosis oki04217   Necroptosis oki04621   NOD-like receptor signaling pathway oki04622   RIG-I-like receptor signaling pathway oki04920   Adipocytokine signaling pathway oki05132   Salmonella infection oki05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     109882539  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     109882539  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     109882539   09143 Cell growth and death    04210 Apoptosis     109882539    04217 Necroptosis     109882539  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     109882539    04622 RIG-I-like receptor signaling pathway     109882539   09152 Endocrine system    04920 Adipocytokine signaling pathway     109882539  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109882539   09171 Infectious disease: bacterial    05132 Salmonella infection     109882539  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109882539    04121 Ubiquitin system [BR:oki04121]     109882539 Enzymes [BR:oki01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109882539 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      109882539 Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     109882539 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-RING_6 zf-RING_5 ATG16 zf-ACC MATH Motif Other DBs NCBI-GeneID:  109882539 NCBI-ProteinID:  XP_020330233 Ensembl:  ENSOKIG00005013883 LinkDB All DBs Position LG3:38958591..38973224 Genome browser AA seq 617 aa AA seqDB search MNVAKTLSVRLEFSQSAVPAKYCSPESAPSGSVILLHVRGEMAAQEPSPPSSLEGNKPGF PKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNKIVSSGPHKCSACIKEDLFE DPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKEYEVNHEGKCDFMIILCPSC KELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDEICPKYPMICEGCAKKKIPR EKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACSYEHLNLLLHFIMGIKVSLE SLQPQSLELAGHKIHELHQALRELELKLGQLTLGGGAPVQGACAPTLPTLALPALATSFT PLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENIVCVLNREMERSSTTIEAYN RQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREMSAATFDGIFVWKISDFTKK RQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRASHLSLFFVVMRGHSDALLKW PFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLPKLDTKNSY IRDDTIFIKAIVDLTGL NT seq 1854 nt NT seq  +upstreamnt  +downstreamnt atgaatgtagcaaaaacgttgtcagttcggcttgagttcagtcaatcagctgttccagcc aaatattgctctcctgaaagcgcccccagcggcagcgtcattctcttgcatgttcgggga gaaatggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccaggattc cctaagaaaattttggcgaacaacctcgaagaaaaacacatgtgcaattcttgtttgaaa atattgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaac aaaattgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgag gaccccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaa gtggaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaa gaatatgaggtgaaccatgagggaaagtgtgacttcatgattattctctgtccctcctgt aaagaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagagg actttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcatgat gagatctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccaga gaaaagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcac gtcgttgggtgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgt tcctacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggag agcttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccaggcc ttgagagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcag ggagcctgtgcccctaccctccctaccctggccctccctgccctggccacctcctttacc cccctgcccagtgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaag gtggcagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaac attgtttgtgtcctcaaccgagagatggagcgctcctccaccaccattgaggcctacaac cgccagcatcgcctggaccaggacaaggttgagatcctcaataacaaggtgcgtcagctg gagagaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaa atgtctgcagctacgtttgatggtatctttgtctggaaaatctccgatttcacaaagaaa agacaggatgctgttgctggcagagccccagctatgttctccccagcatttttcaccagc aaatatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggcc agtcacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtgg cccttcaaccagaaggtgaccctgatgctgctggatcagaataaccgagagcacatcatc gatgccttccgtcccgacatctcctcctcctccttccagaggcccgtcagtgacatgaac atcgccagcggctgcccactcttctgccctcttcccaaactggacaccaaaaactcgtac atacgagatgatactatattcatcaaggctattgttgacctcactggcctctag

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