KEGG   Oncorhynchus kisutch (coho salmon): 109882639
Entry
109882639         CDS       T09179                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109882639 (ercc6l2)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    109882639 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 109882639
NCBI-ProteinID: XP_020330327
Ensembl: ENSOKIG00005017634
LinkDB
Position
LG3:complement(39373057..39388994)
AA seq 1613 aa
MCQTVKRLVLLVNVSLSAYALASYVLPQCFLMMASTSTADIKVWHEGDRCLAPSLRDGTL
LREGTIQKLPSTSHGEDMALVKFTDQHDEDEEEEAVFPVCKLQRPDTNQSSTSVVSAQEK
PLFLCSQTPPGPSEPLVLSQNGVAVPYTINRYLRYYQKEGIQFIYDNYAQSRGCILGDDM
GLGKTIQVIGFLAAVLGKTGTWEDIENNRPQFLLTQIPTQRSKPRKVFLIVAPLSVLYNW
KEELETWGHFLTVVVHGLRKEEELARIRRGRSEIALTTYETLRLYLEQFNSIDWSAVIVD
EAHKIKNPNSQITGAMKDLRCPVRVGLTGTILQNNLDELWCVMDWAIPRCLGSLGNFKNM
FSDPIELGQKHSVTKRALATGRRAVRALAAKLSHWFLRRTKALIREQLPKKDDRVVYCSL
TSFQQTVYQAVLDTEDVTLLLRSSEKCDCHSGHSRRKCCYKVNARGVRVTDLYFSYLAIL
RKVANHAALLQAKWNTSKKQEQYVNEICEKVFQKFPDFTEKCKQAAFEAMSDPMYSGKMK
VLQRLLKHYMQRKDKVLLFSLSTKLLDVLESYCMADGLEYSRLDGNTKPRERLKIVKEFN
SCPDINLCLVSTMAGGLGLNFVGANIVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVFRL
ISLGTVEEVIYLRQVYKQQLQSSVMGKESARRYFDAVQGSDDQKGELFGIQNLFRLQTQG
TCLTRRILEREGRVEVGVMTSSTHTGEEEERKSESEAGEVSARDHCELSNGGAIGSVGAS
RIPRATTRGVLDFSSGSEEEEEEGEQGGKSKVEKENTALPGRLSLLQHGFSRLLQRSGVR
AGSGSESGEHSQSEGGRSDSEEDSDEDTSAMAPKGLSTTGSGGPHTPTLAPKGGNHLDAA
PLKNDWDVSSGSEREEERNGGRWDGQRGRDHDPVTLSGESDDMGRKIQNLKQGIRRKRRV
EEDSDDDSPPSSGSKRSNTKTPVSRMHQVMFDSESEDIDIEELIRPCAQTHVLKRPPAHL
RRREMGRDGGSKREISNRPVDQSRRTRQAEDIETFTSSDENHTPVERVRSVTAPHNHNHG
RGPQTDQHGARAFTNPIVNQTVPSAKGPPCETIDNVLGGVREVVYTHSNQHVVGGSKAEE
RISRAALRDVFERRRFSQLPANELRDTQKTQPEHTPPFHTSHNNDVGWVGAVHRPSVDHS
VTHTIRSVHHPTQHTTVIIGETPGTIRRQQLEEMACVFGSVSLRQFAEEVLRSTSAQRLA
QLRQYYTDQGPEVASIIRQNFAEPHTAQPKVDRTTPSSSSTTKHRPNSKRNQRVALEPQA
EPRTRHRSVPEPQRDVPSSEEQRVRNARGGKKKSGNSGMSRAAQCSSSDLDNSRSSPLGP
GASRAQPVSSSSSSSALSHPQAKPTASPPRGRSSSLLSSPGKSEVVGRQRYRAQPSSPPS
QQVLLTELLGDTSILDDLLRPRSKASEPQRGFPKNPTSQAVFTPTSHSATPASCHPTTPP
KPPSTPHPRPLTKSVPGPSSSTTRPSRSITTPLTHPITPLFSPAPERSKNSHRDFWDILE
EGNEERINKLTDPSEVERVCESASVRARGGTGGGEEKRNTSLWKRNDKFLWKK
NT seq 4842 nt   +upstreamnt  +downstreamnt
atgtgccagacagtgaagagacttgtcttactagttaacgtgagcttgtctgcttatgct
ttagctagttacgtcttgccacaatgctttttgatgatggcttcaacttccacagctgac
ataaaagtgtggcatgagggcgacagatgcctcgctcccagcctcagagatggcacccta
ctacgagaggggacaatccagaaactcccttccacttctcatggtgaggacatggcactg
gtgaagttcacagatcaacatgatgaagatgaagaagaggaggcagtctttccagtctgt
aaactccagagaccagacacaaaccagtcgtccaccagtgtagtgtctgcccaggagaag
cctctttttctctgcagccagacaccccccgggccatcagagcccttggtgttgtcacag
aatggtgtggcagtcccatacaccatcaacaggtacctgaggtactaccagaaggaaggg
atccagttcatctatgacaactatgcccagtccagaggatgtatcctgggagatgacatg
ggcctgggcaagaccattcaggtcattggtttcctggctgctgtgctgggtaaaacaggg
acatgggaagacattgagaacaacaggcctcagtttcttctcactcagatccccacacag
cgaagcaaaccccgaaaggtgttcttgattgtggcccctctgtcggtgctgtacaactgg
aaagaggagctggagacgtggggtcacttcctgaccgttgtagtccacggtctgaggaaa
gaggaggagctggctcgcatccggaggggacgctctgagatcgccctcaccacctacgag
accctacgcctctatctggagcagtttaacagcattgactggtctgctgtgatagtggac
gaggcccacaagatcaagaaccccaactcccagatcactggggcaatgaaggatctgagg
tgtccggtcagagtgggcctcactggcacaatcctgcagaacaacctggacgagctctgg
tgtgtcatggactgggccatccctcgttgccttggcagcctgggtaacttcaagaatatg
ttttcggaccccatcgaactggggcagaagcacagcgtaactaagcgggccctagcgacg
ggcaggagggcggtccgggccctggctgcgaagctctcccattggtttctccggaggacc
aaggctcttatcagagagcagctgcccaaaaaagacgacagggtggtgtactgttcgctg
acgtcgttccagcagactgtgtaccaggcggtactggacacggaggatgtcaccctgctc
ttgcgctcctcagagaagtgtgactgtcacagtggacactctcgcaggaagtgctgctac
aaggtgaatgctcggggtgtgcgtgtgacagacctgtacttcagttacttggccattctc
aggaaggtggccaaccacgcggctttactgcaagccaagtggaacaccagcaaaaagcag
gagcagtatgtgaatgagatctgtgagaaggtgttccagaagtttcctgacttcacagag
aaatgcaagcaggcagcatttgaggccatgtcagaccccatgtacagcggaaagatgaag
gttctccagaggttgttgaaacattacatgcagagaaaagacaaagtgctattattctcc
ctctccactaagctgctggacgtgctggagagctactgcatggcagatgggctggagtat
agcagattggatggcaacaccaagcccagagagaggctgaagatcgtcaaagagttcaac
agctgccctgatatcaacctctgcctggtctccaccatggcagggggtctgggcctgaac
tttgttggggccaacattgtggtcctgtttgatcccacctggaaccctgccaatgacctg
caggcaattgacagggcgtatcgtataggccaatgcagggacgtgacagtgttcagactc
atctctctgggaacagtggaggaggtcatctacctgcgccaggtctacaaacagcagttg
cagtcttctgtgatgggtaaggagagtgcccggcggtactttgatgcagtgcaggggtcc
gacgaccagaagggggagctgtttgggatacagaacctcttcaggctgcagacccagggg
acctgcctcaccaggagaatactggagcgggagggacgagtggaggtaggagtaatgacg
tccagcacccacacaggggaagaggaggagaggaagagcgagagcgaggctggggaggtt
tccgcaagggaccactgtgaactgagcaatggaggggcaatcggcagtgtaggggcctcg
aggatccccagggcaacaaccaggggggtactggacttcagcagtggcagtgaggaggag
gaggaggagggggaacaggggggcaagagtaaggtggagaaggagaacactgcccttcct
ggccgactcagtctccttcagcatggcttctccaggttgctccagaggtcaggggtcagg
gctggatcagggtcagaatcaggggagcatagccagagtgaggggggaaggagtgattct
gaggaggacagtgatgaagacacttctgccatggcaccaaagggcctcagcaccacaggg
agtgggggcccccacacccctacattggcccccaagggtgggaaccacttggatgcagct
cctctgaagaacgactgggacgtctccagtggctctgagagagaggaagaaaggaatgga
gggagatgggatggacagagggggcgagaccatgatcctgttacactgtcaggagagagt
gatgacatggggagaaaaatacaaaatctgaaacaaggaataaggaggaagaggagggtg
gaggaggacagtgatgatgattcacccccctccagtggaagcaaacgatctaacactaaa
actccagtttccagaatgcaccaggtgatgtttgactctgagtctgaggacatagacatt
gaggagctaatcagaccttgtgcacaaactcatgtgcttaagagacccccagcacacctg
agaaggagggagatggggagagatggtggtagtaagagagagatcagcaacagaccagta
gaccagagtagaagaaccagacaagctgaggacattgagacttttacctcctcagacgaa
aaccacactccagtcgaaagagtccgatctgttacagccccacacaaccacaatcatggc
cgaggcccacagacagaccaacacggagcgagggcgtttacaaacccaatagtgaaccag
actgtcccttctgccaaaggaccaccctgtgaaacgattgacaatgtgttaggtggtgta
cgggaggtggtttacacacactctaaccaacatgtggtgggcgggagcaaggccgaggag
cgaatcagcagagccgctctcagagacgtgtttgagcgcaggaggttctcccagcttcca
gccaatgaacttcgggacacacagaagacccagcctgaacacactccaccattccatact
tcccataataatgacgttggttgggtgggagcagtgcacagacccagtgtggaccactca
gtcacacacaccatcaggagcgtccaccaccccacccaacacaccaccgtcattatcgga
gagacccccggaaccatccgaaggcagcagctggaggagatggcgtgtgtatttggatct
gtttcattgagacagtttgctgaggaggttctgaggagtacctctgcccagagactggct
cagctacgacagtactacactgaccagggccctgaggtggcttccatcatcaggcagaac
ttcgcagaaccacacacagcccagcccaaagttgacaggacaaccccttcctcctcctct
acaaccaaacacagacccaactccaaaaggaaccagagagttgctctagaaccccaagca
gaacctagaacccgacataggtccgttccagaaccccagagggatgttccctcttctgag
gagcagagggtccggaacgccagaggagggaagaagaagagtggtaatagtggaatgtcc
agagctgctcagtgctccagctcagacctggacaatagtaggagtagtcctctgggacca
ggggcctctagagctcaacccgtttcctcctcctcctcttcttcagctctcagccatccc
caggctaagcccacagccagccctccgagagggaggagcagcagcctgctgtcctccccc
gggaagagtgaggttgtggggaggcagcggtacagagctcagccttcctctccccccagc
cagcaggtcctcctcacagagctgctaggggacacctccatcctggacgacctgctgcga
cccagaagcaaggcctcagagcctcagaggggcttcccaaaaaaccctacttcacaggct
gtctttacacccacttctcactctgccacacctgcctcctgtcaccctacaacgcctccc
aaaccgcccagcacaccccaccctcggcccctgacaaaatccgtcccaggcccttcttct
agtactactcgtccctctcgatccatcaccacacccctcacacaccccattacaccactt
ttctctccagcccctgagaggtcaaagaacagccacagagacttctgggacattttggag
gagggtaacgaggagaggatcaacaaactgacggacccgtcggaggtagagagggtgtgt
gagagtgctagcgtcagggccagaggaggaacagggggaggagaggagaaaaggaacacg
tcactttggaagaggaacgacaagttcctgtggaagaagtga

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