Oncorhynchus kisutch (coho salmon): 109882975
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Entry
109882975 CDS
T09179
Name
(RefSeq) apoptotic protease-activating factor 1-like
KO
K02084
apoptotic protease-activating factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04115
p53 signaling pathway
oki04210
Apoptosis
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109882975
04115 p53 signaling pathway
109882975
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109882975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
NB-ARC
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
CARD
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
RMC1_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
eIF2A
Beta-prop_HPS5
Ge1_WD40
WD40_like
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
Beta-prop_WDR75_2nd
CARD_2
Beta-prop_SPT8
AAA_16
NACHT
nSTAND1
AAA_22
Motif
Other DBs
NCBI-GeneID:
109882975
NCBI-ProteinID:
XP_031653348
Ensembl:
ENSOKIG00005007268
UniProt:
A0A8C7D6G2
LinkDB
All DBs
Position
LG19:1704234..1773547
Genome browser
AA seq
1266 aa
AA seq
DB search
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRKEQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLKAFDIQCRVLLTTRDRSLADCVSGSKSEVAVESGLEEDQA
LEILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELCSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWVNKSSLKSLSRLVVQPHQGSIYSACFSHDGTNIASCGSSKTLRVFKSTSGEKLL
EIQAHDDEVLCCAFSPDDHLLATCSSDRKVKVWNVERGTLMRMFEDEHEEQVNHCQFTNI
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQREQTEVMVKCSTWSADGRTIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHACPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETKKVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVMFQSENQESRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTTPSSETHLLSWSF
DGTIKVWDMSSGEPLQDLACHQGAVLACDVSPDGQLFATTSADKTAKVWSSASWECVRLL
NGHQDCVRSCRFSWDGRRLATGDDNGEIRLWNVKDGTLLKICSRDNKDAMDSLHGGWVTD
LHFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILY
ILKKVE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggaggaaggggcacggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggtgtgctgacgggg
gacgaggaggacaggatcaggagcaagcccaccaggaaagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgc
gagagctacggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagacggtggcacacgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgcttgcagaaggagcccggctgggtcactgtgttcggcatggctggc
tccggcaagtctgtcttggctgcggaggcagtccgagaccacgcgctcattacagagtgt
tttccgggaggagtccactggctgtccataggccagctggaccggtctgacctgctggtt
aggatccagtcactgtgtttccgtctggagcagcagagccaggagaaagacccctcgtcc
tccctccaccggcctcctggctctctggaggaggccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
aaggcctttgacatccagtgtcgagtactgctcaccacccgagacagaagcctagccgac
tgtgtcagcggttctaagtctgaggtggcagtggagagtggtctggaggaggatcaggcc
ttggagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgc
agcattgtcagagagtgcaaaggctctcccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaag
cgtatccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtg
gaggacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
ggtctagaaagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtgctctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgcc
atactggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactgggtgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctactctgcctgcttctcccacgacggcaccaatatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacgtctggggagaagctgctg
gagatccaggcccacgacgatgaggtgctctgctgcgccttctccccggatgaccatctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaatgtggagcgtgggactctg
atgaggatgtttgaggacgaacacgaggagcaggtcaaccactgtcagttcaccaacata
cgccgacgcctcctactggccacctgttccaacgacaaattcatgaacaccaagctgtgg
aacatcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgacgcctacctctccacctcttccagtgacggaaccctgaag
ctgtgggaggtgtcctcggctaatgagtggaagtccatagacgtggcagacatgttcccg
gagcagagagagcagacggaggtcatggtgaagtgcagcacctggtcagcagacggcagg
accatcatctgtgctgccaggaacgcagtctttgtgtttgatgtagagacggcggccatg
ttgttggagatccggaccagtcgtctgagcacggtgcagtactgtcacgcctgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagact
aaaaaagtccacacctcatcagctgtctgtctgaagagggactctgacgtgctctttaac
aacggtgacattactgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtgatgttccagtcagagaaccaggagtctcgtatccgctgcactgcg
atctgctcacagacctcagctgtggggctgggacgagaggatgggacgatacaggtgttg
gaggtgccgtcggggacctctctagccactcttcagggtcacaccaggacagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccaccacaccctcctcagagacacatctcctcagctggtccttt
gacggcaccatcaaggtgtgggacatgtctagtggtgaaccgctgcaggatctagcgtgt
caccagggggcggtgctagcctgtgacgtgtcgcctgatggacagctcttcgccaccact
tctgctgacaagactgccaaggtgtggagcagtgcatcgtgggagtgcgtgcgcctgttg
aacggccaccaggactgtgtccgcagctgccgcttctcttgggacggccggcgcctagca
accggcgacgacaacggagagatacggctgtggaacgtgaaggatggtactctgctaaag
atctgttcccgtgacaacaaggacgccatggactctctgcatggaggctgggtgaccgac
ctgcacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtgg
aacgtggagaaaggagaggccctccagaccttctacccgacaggagccaatctgaaaagg
atccacgtgtcacctgacttctccaccttcgtcaccatcgacaatatcggaatcctctac
atcctgaagaaggtggaatga
DBGET
integrated database retrieval system
