Oncorhynchus kisutch (coho salmon): 109885371
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Entry
109885371 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109885371
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109885371
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109885371
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109885371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
109885371
NCBI-ProteinID:
XP_031687253
Ensembl:
ENSOKIG00005013208
LinkDB
All DBs
Position
LG9:complement(46421737..46569351)
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AA seq
711 aa
AA seq
DB search
MGEFKELGKFKEMGEFKGMGEFKEMGGSRRWGSSRDYVGVKHALREVEVYYNMDVNCLDP
LGRSALLIAIENENLEVMELLLDHGVATGDALLYAIRKEVVGAVELLLSHRRPGGEKQVP
SLMMDSQFSEFTPDITPVILAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVECASSSEVD
SLRHSRSRLNIYKALASPSLISLSSEDPILTAFRLGWELKELSKVENEFRQEYEELSQQC
KLFAKDLLDQARSSRELETILNHRDDSEELDPRETSHDLAKLKLAIKYQHKEFVAQPNCQ
QLLATLWYDGFPGWRRRHWVVKLGTCSIIGLLFPVFSMIYLLAPKSALGVFVKKPFIKFI
CHTASYLNFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWAEIKEMWDGGFT
EYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLIAEALFAIANIF
SSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETKASD
EPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTY
NVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIVPSPK
SVWYLCLWVHHRLCRRGAPPADNTDKHPDLRKFPPHQRDSLDNRSNTRPHT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcaaggagctggggaagttcaaggagatgggggagttcaagggaatgggg
gagttcaaggagatggggggttcaaggaggtgggggagttcaagggactatgttggcgtg
aagcatgcgttgcgtgaggtggaggtatactacaacatggatgtgaactgtctggaccct
ctggggcgtagcgcgctgctcatcgctatcgagaacgagaacctggaggtgatggaacta
cttctggaccacggggttgctacgggagatgccttgctctacgccatacggaaagaggtg
gtgggggccgtggagttgctgctgtctcataggagacctggtggagagaaacaggtccca
tccctgatgatggacagtcagttctcagagtttactccagacataactccagtcatcctg
gcagctcacaccaacaactatgagatcattaaactactggtccagagaaaagtcacaatt
cccagaccccaccagatacgatgtgactgtgtcgagtgtgcctccagctcagaggtggac
agcctacgtcactccaggtctcgtctgaacatctataaggcgctggcctctccctcgctc
atctctctctccagtgaagaccccatcctcactgcctttagactgggctgggaactcaaa
gaactcagcaaggtggagaatgagtttcgtcaggaatatgaggagctgtctcagcagtgt
aagctgtttgctaaagacctgttggaccaggctaggagcagcagagagctggagactata
ctgaaccacagagatgacagtgaagaactggaccctagagagaccagccacgacctggcc
aaactcaaactggccatcaaataccaacacaaagagtttgtagcccagcctaactgccaa
cagctcctagctactctgtggtacgatgggtttcctggctggaggaggcgacactgggtt
gtcaaactggggacctgttccatcataggactgctgttccctgtcttctcaatgatctat
ctcctagcccctaagtctgccttaggtgtgtttgtgaagaaacccttcatcaagtttatc
tgtcacacagcatcgtacctgaacttcctcttcctcctcctcctcgcctcacaacacatc
gccaggactaacctacatatgcagggccctcctcctactgtggttgaatggatgatacta
ccctgggtactagggtttatctgggctgagattaaggagatgtgggatggaggttttaca
gagtatatacacgactggtggaacctgatggattttgctatgaactccctctacctggct
actatatcactgaagatagtggcttatgttaagtacaactcttcccgtcctagagaagag
tgggagatgtggcaccctaccctgatagcagaagcattgtttgctatagctaatatcttc
agttctctacgactcatctccctgttcacagccaactcccacctgggacctctacagatc
tcactgggacggatgctgctggacatactaaagttcctctttatatattgtctggtgttg
cttgcgttcgccaacggtctgaatcagctttacttctactacgagaccaaggcctcagac
gaacccaacaactgcaagggcatccgctgtgagaaacagaataatgctttctcaacgcta
tttgagactctccagtctctgttctggtccgtctttggactgttaaacctgtacgtgact
aacgttaaagctcgtcatgagttcacagagtttgtgggagccaccatgttcggaacctac
aacgtcatctctctggtggttctgctcaacatgttgatcgccatgatgaacaactcctac
caactcatcgctgaccatgcagatatagagtggaagtttgcccggaccaagttatggatg
agttattttgacgagggtggtactctgccccctcccttcaacatcgttcccagtcctaag
tcagtgtggtacctctgtctgtgggttcaccatcgactctgtaggagaggagcgccccct
gctgacaacacagacaaacaccccgacctacgaaagttcccacctcatcagagagacagc
ctggacaacaggagcaacacgcggccgcacacctaa
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