Oncorhynchus kisutch (coho salmon): 109886714
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Entry
109886714 CDS
T09179
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03272
Virion - Hepatitis viruses
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109886714
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109886714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109886714
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109886714
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF_3
EGF
hEGF
DUF1180
Gemini_mov
TMEM154
Motif
Other DBs
NCBI-GeneID:
109886714
NCBI-ProteinID:
XP_031655180
Ensembl:
ENSOKIG00005021476
UniProt:
A0A8C7HBW0
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All DBs
Position
LG20:complement(51612981..51632612)
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AA seq
877 aa
AA seq
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MLPTRVGITGLTACCLVLLSHCFAPTDAAYTCGTSQFRCGNGKCITSRWVCDGGDDCGDR
TDELPAACEAKTCLPTEFSCGGPLNKCISGTWHCDGKADCDNGADEKGCAAKNCTDNEFR
CSNGQCIAVSFVCDKDNDCSDGSDETSCPTATCGPNAFQCNNTVCVPRLWACDGDADCAD
GSDEWPQNCGGRDTKPTTKPCGPHEFHCGSGECIHRSWSCDGGKDCQDNSDETNCSRPTC
QPDEFQCNDGSCIHGSRQCDRQLDCRDLSDEMDCKSVDACEGPNSFRCKSGECITVDKVC
NRQKDCRDMSDEPIRECGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLGKDNRKCEDI
DECADPDTCTQICVNILGSYKCECEEGYELDPKTKTCKAATGTVPYLLFTNRHEVRKMTL
DRREYVPLIPRLKNVVALDMDMPGHKIFWSDLYHRKIYSADMNLAGNSSHHNVVIDSQME
SPECLAVDWIHGNIYWTDSVLQTISVATTDGTRRKTLISEGLEKPRSIVVDPANNFMYWT
DWGNEAKIEKSGLNGADRVALVTDNIMWPNGITLDMVNQRLYWVDSKMHTLSSIGVNGEG
RHTLIYNEDKLAHPLSLTVFEEKVFWTDMGDRAVMSANRLTGNDITVLAEDLMQPEDIIV
YHNLKQPIGKNWCTEKNFVNGGCEFLCLPAPQINQHSPKYTCACPDHMTLGLDMRKCVAA
PTTTAPSTTPKTAAPIPTRAPTKQPAGPTSTTTTTTSTTSSGRRAQPQDPDRSSTTHSPQ
ETAVTGQSGYVAMPKVAEASHHTVLYIVLPIMMMCLVLFGAVLLWRHWRLKNTNTIHFDN
PVYQKTTEDELHICRNHSQDGYTYPQRQMVSLEEDLA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgactcgtgtgggaatcaccgggctgacagcatgttgcctggtgttgctctcc
cactgttttgctcctacagatgctgcgtatacatgtgggacaagtcagttcaggtgtggc
aacgggaaatgtatcaccagccggtgggtgtgtgacggaggtgatgactgtggtgacaga
actgacgagctgccagccgcctgcgaggctaagacctgcctgcccactgagttcagctgc
ggaggcccactgaacaagtgtatctccggaacgtggcactgtgatggcaaagctgactgt
gacaatggagctgatgagaagggctgtgccgcaaagaactgcaccgacaacgagttccgc
tgctccaacggtcagtgcatcgccgtctccttcgtgtgcgacaaggacaacgactgttcc
gatggttctgacgagacttcctgtcccaccgccacctgcggtcccaacgccttccagtgt
aacaacactgtgtgtgtcccgcgtctctgggcctgcgacggcgacgccgattgtgccgac
ggttcagacgagtggccccagaactgtggcgggagggacaccaaaccgacaacaaagccc
tgtgggccacatgaattccactgtgggagtggggagtgtatccataggagttggagctgt
gatggaggcaaggactgtcaggataattcagatgaaaccaactgcagtcggcccacttgc
cagccagatgagtttcagtgtaatgatggctcctgtatccatggtagccgtcagtgtgac
cggcagcttgactgcagggatctgagtgatgagatggactgcaagagcgtggatgcgtgt
gagggcccgaatagcttcaggtgtaagagtggggagtgcatcaccgtggacaaggtgtgc
aacagacagaaagactgccgagacatgtccgacgaacctatcagggagtgtggcaacaac
gagtgtttgaccaataacggcggttgctctcacacctgtaccgacctgaagattggcttc
aattgctcctgtcctgctgggtacagtctggggaaggacaacaggaaatgtgaagacatt
gatgagtgtgctgacccagacacctgtacccagatctgtgtgaacatcctgggaagttac
aagtgtgagtgtgaggagggctatgaactggaccccaagaccaagacctgcaaggctgcc
acaggtactgtcccctacctgttgttcaccaaccgccacgaggtgaggaagatgactctg
gaccgtagagagtacgtccctctcatccccagactgaagaacgtggtggccctggacatg
gacatgcctggacacaagatcttctggtctgacctgtaccacaggaagatctacagcgcc
gacatgaacttggcagggaactcctcccaccacaacgtggtgattgacagccagatggag
tcgccggagtgtctggccgtcgactggattcacggtaacatctattggacggacagtgtg
ctccagaccatctccgtggcaaccacggacggaacacggcgaaagacactgatcagcgaa
ggactggagaaaccaagaagcatcgtggtggacccagccaataacttcatgtactggact
gactggggcaacgaggccaagatcgagaagagtgggctgaacggagccgaccgcgtcgcc
ttggtaacggacaacatcatgtggcctaacggcatcactcttgacatggttaaccagcgt
ctgtactgggtggactctaagatgcacaccctctccagcatcggcgtaaacggagaagga
cgacacacactcatctacaacgaggacaagctggctcaccccctctctctcaccgtcttc
gaggagaaagtattctggaccgacatgggtgacagagcggtcatgagcgccaaccgcctg
acaggaaatgacatcactgtactggcggaggacctgatgcagccagaggacatcattgta
taccacaacctcaagcagcccatcggaaagaactggtgcacagagaaaaactttgtgaat
ggaggttgtgagttcctatgtctacctgctccccagatcaaccaacactcccccaaatac
acctgtgcctgtcctgatcacatgaccctcggcctggacatgaggaagtgtgtggcagct
ccaacaactaccgctccctccaccactcccaaaactgcagctcccatccctaccagggcc
ccaaccaaacagccagccggccccacttccaccacaactacaactacctcaactacctcc
tccggccgccgggcccagcctcaggaccctgataggtcctcgaccactcacagtccacag
gaaactgcggtcacaggtcaaagtggctatgttgccatgcccaaagtagctgaggcatca
caccatactgtgctctacattgtcttacctatcatgatgatgtgcctggtgctgtttggt
gcagtgttgctatggagacactggaggctgaagaacaccaacaccatccactttgacaac
cccgtgtaccagaagaccacagaggacgagttgcacatctgtagaaaccacagccaggac
ggatacacctacccacagagacagatggtgagcctggaagaagacctggcatga
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