Oncorhynchus kisutch (coho salmon): 109887588
Help
Entry
109887588 CDS
T09179
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109887588 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109887588 (smcr8)
Membrane trafficking [BR:
oki04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109887588 (smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
109887588
NCBI-ProteinID:
XP_031670307
Ensembl:
ENSOKIG00005044964
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MIGAPDVVAFTKEEAFGEVGYPNPWVVPEEFSVPLFPSNNNANPWAKTSYAKFTKDFILI
SEFSEQVGPQPLLTIPDDPKVFGTFDLNYFSLRIMSVDYQASFVGHPTGSGYPRLSFVED
SRVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLLFSRAS
ECLKTGNRRAFARELQRKLRDLEYTRSVLQKEEGLQREAGPQGCYSACAVDKANELAAME
KSIYEHRDLLRQITSYPLRPRRDPHAAHCHHCVTESQRHRDAPPGPDRDTGEEAGQRRQS
YTPQLIKGKSAKCFAKRLKNLTELCEERFYEATVELLNHTERCFRGDLCYLYTRRLDRAL
RRKQNITNFLFEEELGEEEEEVAVLGRIFCSLKHTVGTDSHIHTPSIVLCPEPPESVEVN
PPCPDNSAQQSVALTGEERLESSLSDLTMETQDQESSEENKDSFSSDRSGGEEEEGREGG
DQTPVFLLEAEEGGEGETHRVCEREGEAEGVLNREREGEAEGVFNGEREGEAGVLGREEG
GAETEEGGAETEEGEAETEEGEGQRAPDPELLVQMDTACCMSQEGFLYNSSPPDTLPASG
LQPGSLPLPLVVNQEPQALLPVQGDYGLGSPHCQSPGAGLDLPVSSSGDTTSRGSDQDGW
DCTMSASTGSERAGSPLGYGGLVTLRQKKRAGQGALRFVRQYPFALHALWSLLSGRTLVV
LGSEEGRVRRLVSALALYVPGPGRCGERVQPWLSCPFSLTDLQRWKLIGLQRMASPVGTS
MLCSLSRYSRYISVLDADRKTLRCPGYRGTLLANVADHRTRLRRGSTYFLHLQNVLSRLA
SRAFLLSFTHHLHLPISHLEQRQEVEERTRGFLRDQLRLGEDDCSILMYLSQLITQHYLD
STSVGAVTTQPHLEKDNTPGTNQQHLDSTSVGAVTTQPHLEKDNTPGTTQQDLEANNILD
PATGGAITPEQYLDPTTGGTINPEQYLDPTTGGTITPETGLDPTTGGTINQQDPESNTGG
RVNTGQYLDPTTGGAITPEQYLNPSTGGAITPEQYLDPTTGGAITPEQYLDPTIHQSATR
SRAPPSFTFNYTTSLLYKI
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgccccagacgtggtggcgtttactaaggaggaggcttttggggaggtaggg
taccccaacccctgggtggtgccagaagagttctctgtccctctgttcccatcgaataac
aacgccaatccctgggccaagacgtcatacgccaagttcactaaggacttcatcctcata
tcagagttctctgagcaggtgggcccccagcctctgctcaccattcctgacgacccgaag
gtgtttgggacctttgacctcaactacttcagtctgaggatcatgtctgttgactaccag
gcctcgttcgtaggacaccccaccggcagcggatacccacgactcagttttgtggaggac
tcccgggtggtgctgggtgactctaaggagggggcgtttgcctacgttcaccacctgacg
ctctatgacctggaggcccggggcttcgtccgcccgttctgcatggcctacgtctctgcc
gacgagaggaagatcatgctgcagttccaggagctgtcgctcctcttctcccgcgcctcc
gagtgcctgaagaccggaaaccgacgggccttcgcccgcgagctgcagaggaagctacgt
gacctggagtacacacggtctgttctgcagaaagaggaggggcttcagcgggaggcgggg
cctcaggggtgttactccgcctgcgcggtggacaaggccaatgagcttgcggcgatggag
aagagtatctacgagcaccgagacctgctgaggcagatcacctcgtaccccctccgtccc
cgccgagacccccacgccgcacactgtcaccactgtgtcaccgagtcacagagacacaga
gacgcaccgcctggccccgaccgtgacacgggggaggaggcgggacagaggaggcagtcc
tacaccccgcagctgatcaaggggaagtcggccaagtgtttcgccaagcgtctgaagaac
ctgacggagttgtgcgaggagaggttctacgaggccaccgtggaactactcaaccacaca
gagcggtgtttccggggggacttgtgttacctgtacacccgccgcctggaccgagcgcta
cgcaggaagcagaacatcaccaacttcctgtttgaggaggagctaggggaggaggaagag
gaagtagcggtgctgggaagaatcttctgttctctcaaacacacagtggggacggactca
catatacacaccccttccatcgtgctttgccccgagccaccggagtctgtggaagtgaac
cctccctgccctgataactctgcccagcagagtgtggccctgaccggggaggagaggctg
gagtcgtcactctctgatctgaccatggagacgcaggaccaggaaagctctgaggagaat
aaggacagctttagtagtgacaggagtggaggagaggaggaggagggacgggagggagga
gatcagacccctgtttttctgctggaggctgaggaggggggagagggtgagacacaccgt
gtgtgtgagagggagggagaggcagaaggagtgttgaacagagagagggagggagaggca
gaaggagtgtttaacggagagagggagggagaggcaggagtgcttgggagagaggaggga
ggggctgagacagaggagggaggggctgagacagaggagggagaagctgagacagaggag
ggtgaaggacagagggctcctgaccctgagttactggtccagatggacacggcctgctgc
atgtctcaggagggcttcctgtacaactcctctcccccagacacgctgcctgcttctggg
ctgcagcccggctctctaccccttcccctggtggtcaaccaggagccccaggccctgctg
ccggtccagggggactacggcctgggttccccccactgccagagccctggggctgggctg
gacctgcccgtctcctcctcgggagataccacctccaggggttcggaccaggacgggtgg
gactgtaccatgtcagcgtctacggggtccgaacgggccggctcacctctggggtacggg
gggttggtaacgctgaggcagaagaagagggccgggcagggagcgctcaggtttgtgcgt
cagtatccgtttgccctgcatgccctgtggtccctactgagtggtcgaaccctggtggtc
ctgggatctgaggaggggagggtcaggaggctggtgtccgctctggccctctacgtgcct
ggacccgggcgctgtggggagagggtccagccctggttgtcctgccccttcagcctcact
gacctacagcgatggaaactcataggactgcagaggatggcgtctcccgtggggaccagc
atgctctgctctctgtctcgctacagccgttacatctccgtcctggacgccgaccggaag
accctccgttgccccggctaccgcggaaccctcctggccaacgtggcggaccaccgaacc
cgtctgcgtcgaggttccacctacttccttcatctccagaacgtgctcagtagactggct
tcccgggccttcctccttagctttacgcatcacctccaccttcccatcagccacctggag
cagagacaggaagtggaggagaggacgaggggcttcctgagggatcagctcaggcttggg
gaagacgactgttccatcctgatgtacctgagtcagctgatcacacagcactacctggac
agtacctcagtaggagctgttacgacacaaccccacctggagaaggacaacacgcctgga
accaaccagcagcacctggacagtacctcagtaggtgctgttacgacacaaccccacctg
gagaaggacaacacgcctggaaccacacagcaggacctggaagctaacaacatactagac
cctgccactgggggtgctataaccccagagcagtacctagaccctaccactgggggcact
ataaacccagagcagtacctagaccctaccactgggggcactataaccccagagacgggc
ctagaccctaccactgggggcactataaaccaacaagaccctgagtctaatactggaggc
agagtgaatacagggcagtacctagaccctaccactgggggcgctataaccccagagcag
tacctaaacccttccactgggggtgctataacccccgagcagtacctagaccctaccact
gggggtgctataaccccagagcagtacctagaccctaccatccatcagtctgctactagg
agcagagctccacccagcttcacctttaactacaccaccagtctcctatacaagatctga
DBGET
integrated database retrieval system
