Oncorhynchus kisutch (coho salmon): 109889523
Help
Entry
109889523 CDS
T09179
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109889523
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109889523
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109889523
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
109889523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109889523
NCBI-ProteinID:
XP_020336587
Ensembl:
ENSOKIG00005011287
UniProt:
A0A8C7FG95
LinkDB
All DBs
Position
LG4:complement(40357942..40384738)
Genome browser
AA seq
485 aa
AA seq
DB search
MNEWVGPEVNVVGPLQIPHNDGFPLSENSHFFDILADQGSPLLQDQEVLSFTNYPSMQYP
SVEPTMASPPYYSNQNYYPQYSVEEWYSPTEMYELRKEPLEGSYDVEMEEASAIVPAVCK
RTRHTSHAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSKGTCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASPGESTWDETEGGDNG
DSKQVTSTTKLSKEKIELSQEQQAILSFIVGAYQKHRIPQDMAKKLLQEHFNADENFLLL
TEMATSHVQVLVEFTKNIPGFSALDHEDQIALLKGSAVEAMFLRSAQVFTRKLPHGHTEV
LEDRIRKSGISEAFITPMFNFYKSIGELQMMPEEHALLTAITILSPDRPYLKDQQAVERL
QEPMLELLRRFCAMQHPLEPQHFARLLGRLTELRTLNHHHAEMLTSWRMSDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccccgaagtaaatgtggtgggaccactacagatcccacacaac
gatggattcccattgtccgagaactcacacttctttgatattctggcagatcaagggagc
cctctgctccaggaccaagaggtcttatccttcaccaactatcccagcatgcaatacccc
tcggtggagcccaccatggcctcccctccatactactccaatcagaattactacccccaa
tacagcgttgaggagtggtactcacccacagagatgtatgaactgaggaaagaacccctg
gagggaagctacgatgttgaaatggaagaggcatccgccatagtgcctgcggtgtgcaag
aggaccaggcacacttcccacgcaggcagggtcaaaggggaggagctgtgtgtggtgtgt
ggggacaaggcatctgggtaccactataacgctctcacctgtgaggggtgtaaaggcttc
ttcagacggagcatcacaaagaacgccgtgtacaagtgcaagagtaaagggacctgtgag
atggacatgtacatgcgcaggaagtgccaggagtgtcgtctccggaagtgcaaggagatg
ggcatgctggcagaatgtctgctgacagagatccagtgtaagtctaaaaggctgaggaaa
aacaccaaggcctcaccaggagagtccacttgggacgagacagagggtggagacaacgga
gacagcaagcaggtcacctccaccaccaaactgtcaaaggagaagattgagctcagtcaa
gagcagcaggctattttgagcttcatcgtaggagcttaccagaagcatcggatccctcaa
gacatggccaaaaaactgctacaggagcatttcaatgcagatgagaacttcctccttttg
acagagatggccaccagtcatgttcaagtgctggtagagtttaccaaaaacattccaggt
ttctctgccctggaccatgaggatcagatagctctgttaaagggctcggcagtggaggcc
atgttcctgcgctcagcacaggtgtttaccaggaagctaccccatggacacacagaggtg
ctggaggacaggatacgcaagagtggaatatcagaggcgttcattacacccatgttcaac
ttctacaaaagcatcggggaactccagatgatgccggaagaacacgcccttctcaccgcc
attaccatcctgtcaccagaccggccatacctgaaagaccagcaggcagtggagaggctg
caggagcctatgctggagttgctcaggaggttctgtgcaatgcagcacccgctggagccc
cagcactttgcccgtctcctgggacggctgaccgaactgcgaaccctcaatcaccaccac
gccgagatgcttacctcttggcgcatgagcgaccacaagttcacccccctcctctgtgag
atctgggacgtacagtga
DBGET
integrated database retrieval system
