Oncorhynchus kisutch (coho salmon): 109890835
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Entry
109890835 CDS
T09179
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109890835
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
109890835
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
Atx10homo_assoc
Arm_2
Adaptin_N
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
109890835
NCBI-ProteinID:
XP_020338479
Ensembl:
ENSOKIG00005005456
LinkDB
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Position
LG5:complement(27768334..27788485)
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AA seq
751 aa
AA seq
DB search
MMTMDPLKSAMSIGNVDETSLALPSDKKLRSKQQRVLDQVQTIKRGKSKYSKHGSVSSPT
TSPTSPVYINIFADSFKSPTSLNGGAFFNGTNGLSKTLSYEKSTKRRVVASKESTVQRNM
SSSSQWERRFPLSPTIGKHNSSRSVPDLAPFPTTTSTTTTMQQQLLQSSAPARQLQPNRS
SFFLTERNSSQVISNGNSSSQVAVKGNEMQKRNSQLIGTRQTKSSGQITSSQGRIERAPS
NLSVAESKISGIKIKGEEGINGNGQIADITMKEAVEYLSSGDENYQLCGASFIQHATYSE
DKAKQEVLRLKGIPPLVNLLRCPSPQVQQTASAALRNLAFKDAGNKEEVQRCGGITEALA
LLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGDETNNNQDPEV
FYHATACLRNLSCATQGNRQAMRNCRGLVDSLVSYVQRCVAAERPDDKSVENCVCILHNL
SFQLESEAPALFSRINALARTPSRANTPSETGPIGCFSPQSSKVQDQESHFDYPVMEEQN
PKGAGWLFHSKTMQSYLSLLGSSQREETLEACSGALQNLTAYHGIVSSVISQSIVQKLNG
LPHISPLLQSSNPSLQKTAVSLVGNLAKNQRLQSTMARQTLPELVGILSSWTKEETECDD
TLAMACQTSHSLLMKEPELGKPLLTNKLVNSVNDLSKNRDFPKASKAAGVLLYSLWSEKD
VQSFLKKQGMNKGSFVNDITSAAHRSVQVIE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggatgagacatct
cttgctttgccatccgataaaaaacttcggtccaaacagcagcgagtcttggatcaggtg
caaaccatcaagaggggcaagtcgaagtacagtaaacatggatctgtgtcgtcgccaacg
acatccccaacgagtcctgtgtacatcaacatattcgctgactcctttaagtcacctacc
agtcttaatgggggtgccttctttaatggtacaaatggcctctcaaaaacgctcagctat
gagaaaagcaccaagcgaagggtcgtggcctccaaggaatctacggtccagaggaacatg
agcagctccagccagtgggagagacgattccctctcagccccaccataggcaagcacaac
agcagccgcagtgtgcctgacctggcccccttccccaccactactagtaccaccaccacc
atgcagcagcagctactgcagtcctcggcccccgcccggcagctccagcccaacaggtcc
agcttcttcctgaccgagaggaatagcagtcaggtcatctccaatggcaacagctcctct
caggtcgctgtcaaaggcaacgagatgcagaaaaggaacagccagttgattggcacgcgt
cagacgaaaagtagtggccagattaccagcagccaaggtcgtattgagagggcaccctca
aacctctctgtggctgagtccaagatatcagggatcaagatcaagggtgaagaggggatt
aatggtaatggtcagatagctgatataaccatgaaggaggcggtggaatacctgtccagt
ggagatgagaactaccagctctgtggagcctccttcatccaacacgctacctactcagag
gacaaggccaagcaggaggtgttgcggctcaaagggatcccccctttggtgaacctgctt
aggtgtcccagtccccaggtccaacagactgcctccgccgccctgcggaacttggccttt
aaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatcactgaggcactggcc
ctgctccgagacacagactctaccgagacacagaaacaactcacaggtctcctttggaac
ctgtcatctgcagacagtctgaagccagagctggtgcgtagtgctctgcctgtcctgact
gagactgtggtagtaccatacactggagatgagacaaacaacaaccaagatccagaggtc
ttctaccatgctacggcatgtctacgaaacctgagctgtgcgactcaaggcaacaggcag
gccatgcgtaactgtcgaggcctcgtcgactctctggtcagttatgtccagcgttgtgtg
gctgcagagaggccagatgacaagtctgtggaaaattgtgtgtgtatcttgcacaacctg
agcttccagctggagagtgaagccccggccctcttcagcaggatcaatgccctggccagg
acccccagcagggccaacacccccagtgagaccggccccattgggtgcttcagcccacag
agcagcaaggtccaggaccaggagagtcactttgactaccctgtgatggaggagcagaac
cctaaaggagcaggctggctcttccactccaagaccatgcagagttacttgtctctgctg
gggtccagccagagagaagagaccctggaggcctgctctggagccctgcagaacctcact
gcttaccatggcattgtatctagtgtgataagccagagcatcgtgcagaagctgaacggc
ctgcctcacatctctcccttgctgcaatcctccaaccccagcctccagaaaactgctgtg
tctctggtagggaacctggccaagaaccaacgccttcagagcaccatggcccgacagacc
ctaccagagctagttggcatcctcagctcatggaccaaggaagagacggagtgtgatgac
accctggccatggcgtgccaaaccagccacagcctgctgatgaaggagcccgagctgggg
aaacccctgctgaccaacaaactggtcaactcagttaacgacctgagcaagaacagggat
ttcccaaaggccagcaaagctgcaggtgtgctcctctacagcctctggtcagagaaagac
gtacagagtttcctaaaaaagcaagggatgaataagggttcctttgtgaacgacatcacc
agtgcggctcaccggtctgtgcaggtcattgagtaa
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