Oncorhynchus kisutch (coho salmon): 109892825
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Entry
109892825 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109892825
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109892825
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109892825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
TPR_BSK1_C
zf-RING_2
TPR_1
zf-rbx1
TPR_2
zf-C3HC4
TPR_11
zf-C3HC4_2
TPR_16
zf-RING_UBOX
zf-RING_5
TPR_17
zf-C3HC4_3
zf-ANAPC11
Prok-RING_1
zf-RING_11
ANAPC3
zf_RING_Vps8_fungal
zf-RING_Vps41
PHD
TPR_19
TPR_9
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
109892825
NCBI-ProteinID:
XP_031682580
Ensembl:
ENSOKIG00005043287
UniProt:
A0A8C7KC61
LinkDB
All DBs
Position
LG6:complement(39241116..39272976)
Genome browser
AA seq
1830 aa
AA seq
DB search
MSDSDSGPEFLDCDIRHGAKLIYDKDSPFVALQPPDVIYERWNKIPVILKKKAAQLMKLY
AFWYHILLRQENHNTTRWAVQVGFLDSNVSNDLSLKRLHKIEILEAILRAMEKGCLLEDQ
TRHMIWISNKFNLHVPEVLDDAIRWLERTGEPRIKLRVQELGPIGNCFAALQLIFTEYAH
YTQAMGVDRKKMMRELAQDPSQWSIEKSEEMKTRGNDQFQKKKYDAAVKCYSKAIKYHPE
NHIIYGNRALCYIRSEKYLKAVGDGKRATLIQPEWAKGHYRYCEALFLLGEHKQAIEANE
WGQTLCKADPEGMKDLLQQHYKFNIEIEESKCHRAEERKAGRSNKTAAKKVSSKRTESNT
RADTTESQQAAKPTSKVEPSAKNTVPENKGLEVKVESQTQPGTRRAHSVDNTKVPKEMKV
EMADKNSSKPEPCSSEKTKGKNRNQQSKEKAVSGSSRDPSVRDALMSAVQDAHMALADQR
CRNAEQAFSQALSILVTSTPKELGLCTLDQVVLIYGHASALIEIGQPEELAEAHKDFEKI
KHFEERKFQCLVFYGIGKAYQKENRFPLALEQFSDSMQMVKKKITPGKLTWPTTKVIVEE
SKLDYFKELLEESIEMCKFPPKPDAICRHQNCHGHSKIEIYFTDPDFKGFIRMVCCQSCK
VEYHINCWKKLKATAFSDKNEKDFLQGMCFTPDCGGRICHIKIYGSTGLVKCEFEASIDK
LMGKATLRVNQKCTSLKKLKSREDRKLRRKQHRQDASLSTQAKNDQIPLENGETIVIEPK
ASSPAWLAYGDRVLLQISERIDLFRAESHNISVLMENLKPWMDLDQIKGNKLGTSYTERQ
VETLGDVVELLLEKKNRVWARVFIHGLSSCLVTSPKLHDWAHQLNSAGLNSAALFIDRYA
DHLEQLDLAPLLNFAPLQDMLIEKFGTMPEFFSRLGLTLTEYLKQAPSQEMRLFIWTLEE
HRDQYTTCHTVLDDYFELMDGHCLVIKKTGIENEINSPIKTKNRNRKKKQKEPKGSVIVL
SGMRGGTSREEDDEDFLHDSLMFLDSTDPFSIPNHLRNQVAEFEGQYNIGSRSSHYNRIL
DNNPDPTKESLYDYFAQILEVYGPLRAQDPLLVGELDNFPPDAQQKIQEAGGLEHFLLES
LRFVMTDNLLGLMKHAVSLQDTNTHRMDNLDFIGDITNGLSLNPSAMEFLPNSHDSGPRD
YDEEPFAIINVRPNPVEFTGYLEVIANLPSPYVLPVFGAPPAPPANEMAHAIGTLRAEDM
SYNNHDPRNLEAFDLYISGVDERGLCETVYAPVLGAKAPGKTAVEVQVVTCDTFSEVAVN
TEPYEPFEGNNGDMNKKEKSNAEFEQQIQQMKQDYGAVKQRRQTEISALEGEQEEINLSI
QIIHKELGLFQQKLEEEVKKDQQEKKENQETLKALKIEIKELAESQESISKNIHKKNKEY
ETQLNNFLELSNQSAAEKMSLEDELKRCRDLCAKATRRSQGAELSILENQRSRGLRCLYR
SLSDARAVLAKLKEVSPRLPSQILQSATEAWIACAQEAEEKIRSTEAQYQDQMEQVKRGT
RLCTLPPVAVPSAPWPPPVPAHQQLPCPPVHMRAPLYGHLGLPRAPPAPAMDQSVALPSG
MARVPPSATTNRPITRPNQASRPPAPQPTNVYDRIVDRLSVMFPHYSRPVLSKFIGEMRT
ANRGCLNSLSYQEVINRVAQLILDHQDSTREQLSSAGMGDTAGPPSRSDSPASVHSTGPP
AHVWKSVGAQGHSKSKALNMEDPCIICHEDMSQEDLCVLECRHSFHRECIKSWLKEQSTC
PTCREHALLPEDFPLLPGRIRRGHTPAAFS
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattccgactccggtccagagtttttggactgcgacatcagacacggggcgaaa
cttatctatgacaaagacagtccctttgtagccctgcaacctccagatgttatatatgag
cgatggaataaaatccctgtcattttgaaaaagaaggcggcccagttaatgaaattgtat
gccttttggtaccacattctgctgcgtcaagagaatcacaacaccacacgctgggctgtg
caagttggcttcttagactcaaatgtcagcaatgacttgagtctgaagagactgcacaag
atagaaatattggaggctatcctcagagcgatggaaaaaggatgtttattagaagatcaa
acaaggcatatgatctggataagcaataaatttaacttgcatgtgccggaggtcctggac
gatgcgatacgctggctggagcggacaggagagccccgcatcaagctgcgggttcaggag
ctgggccccatagggaactgctttgctgccctgcagctcatcttcactgagtatgcccac
tatacacaggccatgggagtcgacaggaaaaaaatgatgcgagagcttgcacaggacccc
agccaatggtctattgagaaaagtgaagagatgaagactagaggaaatgatcagtttcag
aaaaagaaatatgatgcagcagtcaagtgttactcaaaagccatcaaatatcaccctgaa
aaccacattatctatgggaaccgagcactttgctatatccgtagtgaaaaatatttaaaa
gctgttggggatggaaaacgagcgactttaatacaaccagagtgggcaaagggtcactac
cggtattgtgaggcgctgttcctactgggggaacacaagcaggcgatagaggccaacgag
tggggtcagaccctgtgcaaggctgacccagagggcatgaaggacctgctgcagcaacat
tacaagttcaacatagagatagaggagagcaagtgccaccgggcagaggaacgcaaagct
ggaagatcaaataaaactgcagctaagaaagtttcaagtaaaaggacagagagtaacacc
agagcagacactacagagtcacaacaggccgctaaacccaccagtaaggttgagccttct
gctaaaaacactgttcctgagaacaagggcttggaagtcaaggtggaaagccagacacaa
ccaggtacaagaagagcacattcggtggataataccaaggtgcctaaagagatgaaagtt
gaaatggctgataaaaatagcagcaaaccggaaccctgctcttcagagaaaacgaaaggg
aagaacagaaaccagcagtcaaaggaaaaggcggtatccggcagctccagagaccctagt
gtgcgggatgcactgatgtcagctgtgcaggatgcccacatggccctggctgaccagcga
tgccgcaacgcagagcaggccttctcccaggccctcagcatcctggtgaccagcacacca
aaggaacttggcctctgtactcttgaccaagttgtgctgatttatggccatgcctcagct
ctgatagagattggtcaaccagaggaacttgctgaagctcataaagactttgaaaagatc
aaacattttgaagagaggaagtttcagtgcctggttttttatggcattggaaaggcatat
cagaaggagaaccgatttccacttgctctggaacagttttctgattctatgcaaatggtt
aagaaaaagataacgcctggtaaactgacctggcccactactaaagttattgttgaggaa
agtaagctggactatttcaaggagctgctagaagaatccatagagatgtgcaaatttcca
cctaaaccagatgccatttgtcggcatcagaattgccacggacattccaaaatagaaatc
tacttcacagatccagatttcaagggtttcattcggatggtttgctgtcaaagctgcaaa
gtggagtaccatatcaactgttggaagaagttgaaagcaacagcattctctgataagaat
gaaaaggatttcctgcagggaatgtgctttactccagactgtgggggtagaatctgtcat
attaaaatctatggttcaacagggcttgtcaaatgtgagtttgaagcatctattgacaaa
cttatgggtaaagcaacattgagagtaaatcagaaatgtacaagtctcaagaagttaaaa
tccagagaggatcgtaaactcaggcggaagcaacataggcaagatgcttctctgtctacg
caagccaagaatgatcaaatacctttggagaacggggaaactattgtcatagaaccgaag
gcttcatcccccgcctggctagcttacggggaccgtgttctgcttcagatcagtgagcgt
atagacctattcagggctgagagccacaacatctctgtcctgatggagaaccttaagcca
tggatggacctggatcagatcaaggggaacaagctgggcacttcttacactgagaggcag
gtggagaccctgggggatgttgtagagctcctcctggaaaagaagaaccgggtgtgggcc
cgtgtctttatccatggcctaagtagctgcctggtcaccagccccaagctgcacgactgg
gcccaccaactgaacagcgcaggtctgaattcagctgcactgttcattgaccgctatgca
gaccatctggagcagctcgacctcgctcctttgctcaattttgcccccctgcaggacatg
ctcatagagaagtttgggaccatgcctgagttttttagccgcctaggcctgactctaacg
gagtacctgaagcaggccccttcccaggaaatgaggctgtttatctggactctggaggag
cacagagaccagtacaccacctgccacactgtgctggatgattattttgaattaatggac
gggcattgtttagtgattaaaaagacagggattgaaaatgaaattaattctcctattaag
actaagaacagaaaccgcaaaaaaaagcagaaggagccaaaggggtccgttattgtcctg
tcgggaatgagaggtggtacctcaagagaggaggacgacgaggattttttacatgactct
ttaatgttccttgactccactgacccattcagcattcccaatcatcttcgaaatcaggtt
gcagagtttgagggacagtacaacattggcagtcgcagtagccactacaatagaatattg
gacaacaaccctgacccaactaaggagagtttgtacgactactttgcccagatcctggaa
gtgtacggtcccttaagggcccaggaccccttgctggtcggtgagctggacaacttccct
cctgatgcccagcagaagatccaggaggcaggtggccttgagcacttcctcctcgagtct
ctgcgcttcgtcatgaccgacaacctcctgggcctcatgaagcacgctgtgtcactgcag
gataccaacactcacagaatggacaatctagacttcataggggatatcaccaatggactc
tctctaaacccttctgctatggagttcctcccaaactctcatgactctggacctagggat
tatgatgaagagccttttgccatcattaatgtgcggcctaacccggttgaattcactggc
tatcttgaggtgatcgccaatctccccagcccatatgttttacctgtttttggtgctcca
ccagccccacctgccaacgaaatggctcatgccattggaactctgagagcggaggacatg
tcatataataaccatgatccacgtaaccttgaggcgtttgacctttatattagcggcgtg
gatgaacggggattgtgtgagactgtttatgctcctgttctcggtgccaaggcacctgga
aagactgcagtggaagtacaggtagtaacttgtgacacgtttagtgaagtggctgttaac
acagagccttatgagccttttgaagggaataatggagacatgaacaagaaagagaagagt
aatgcagagtttgagcagcagatccagcaaatgaagcaggattacggcgctgtgaagcaa
agacgccaaacggagatatctgccctagaaggagagcaagaggaaatcaacctttcaata
cagatcatccataaagagctgggcctgttccagcagaagctagaggaggaggtgaagaag
gaccaacaggagaagaaagagaatcaggaaacactgaaggccttaaagattgagataaag
gagctggcggagtcacaggagagcatttctaagaacatccacaagaagaacaaggagtat
gagacccagctgaataacttcctggagctgagtaaccagtcagctgctgagaagatgagc
ctggaggatgagctcaagcggtgcagagacctgtgtgccaaggcaactaggaggtctcag
ggagcagagctgtctatattggagaaccagcgtagccgtggcctgcgctgcctctacagg
tctctgtctgacgccagggccgtcctggccaaactcaaggaagtctcacccagattacct
tcccaaattctccagtcagccacagaggcttggatagcatgtgctcaagaagcagaggag
aaaatccgctcaactgaggcacagtaccaggatcagatggaacaggtgaagagggggacc
aggctgtgcactctacccccagttgcagtccccagtgccccctggcccccacctgtaccg
gctcaccagcagctcccttgccctccagtgcacatgagagcccccctctacggtcacctg
gggttgcctagagcccctcctgccccagccatggatcagagtgttgcactgccctccggt
atggctcgagttccacctagtgctaccactaaccgtcctatcacaaggccgaaccaggct
tccaggccaccggccccacagcccaccaatgtgtacgatagaatcgtagatcggctcagc
gtcatgttccctcactatagcaggcctgtgctttccaagttcattggggagatgcgcaca
gccaacagaggctgcttgaactccctgtcctaccaggaggtcatcaacagagtggcccag
ctcatcctggaccaccaggactccaccagagagcagctgagcagtgctggtatgggtgac
actgctgggcccccttcgcgctctgactctccagcctctgtccactctactggacccccc
gcccatgtctggaagagtgtgggtgcccaaggacactccaagtcaaaggcgttgaacatg
gaggatccctgtatcatctgccatgaggacatgtcccaggaggacctgtgtgtgctggag
tgcagacacagcttccacagagagtgtattaagtcgtggctgaaggagcagagcacctgt
cccacctgcagagagcacgctctcctgcccgaggatttccctctgctacctggcagaata
cgcaggggccacacgcccgctgctttctcttaa
DBGET
integrated database retrieval system