Oncorhynchus kisutch (coho salmon): 109893126
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Entry
109893126 CDS
T09179
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109893126
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109893126
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
109893126
NCBI-ProteinID:
XP_020341779
Ensembl:
ENSOKIG00005031512
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All DBs
Position
LG6:61012228..61083052
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AA seq
1257 aa
AA seq
DB search
MKDTDKRHEGGGRRTGTEKSEKDQSWIPKIIKKRVCTTFVEDSLSNGVLCQCGGVRETHC
SIATGDFFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRHSHFLRLSCDTPPHIIYSL
MTAHWGVPSPNLVVSVVGGREKVKPWVREVLRQGLVRAAQSTGAWIVTGGLREGVGRCVG
EAVRDHAAAASSLSQKKVIAVGVAPWGLVHNRQWLVNSEGSFPARYYVQNTSHDSCCLDS
NYQAFLLVDDGSVGQRGGETAFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAAMLE
RVDLSLKKATPWLVLNGSGPAADLICELLDALSAGPMSPPSPQPEVEGSEKTSAELRDRA
RERVRRHFPAKADLEKLVDRALSIYKNRDLITVFHGEQESSDDFDTVLLKALVRASKRVS
SDASEYTEELKLAVAWNRVDIAKSELFNGDIQWKYEDLEDSMTDALINDKPQFIRLFNEN
GLNILDYLTYRHLEVLYRSLSDSSLAFTLLQRLLTERQGLAICSPKEAVALKSPQNPMSP
LSGPSSVKELSLYEVSRLLWDILGDVCEPFYYSLLGLDQSASTRRALKQVNKLLQGDCSY
REQSCLYPWASLFIWAVLQNRSEMAVYFWEMAGESVHSALAGCKILRELSKLESETETKL
SMKELAQKFENLALDVFSECYQSSESRSFTLLIRQSPVWGKATCLQMATSADARHFFSHD
GVQSLLSQIWWGDMKRSTKVWKLVLSFFLPPLIYTNLISFREHEEEVRSEEVPLGRDTES
LDGGDATMLSLSDIMQTEEDVEEYAALRDNLKSAPSSNPKRPFVLLRWREFWFAPVTSFL
GNVLMYFLFLILFAYILLLDFKPPPPHGPSTLEFVLYFWVFTMVCEEIRQTFFRGNTTLY
QRMKLYIEDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVLAVDYMVFTLRLIHIFAIH
KQLGPKIIIVEKMMKDIFFFLFFLAVWLLAYGVANQALLYSYDPRPGWIFRRVFYRPYLH
IFGQIPIHEMDADKLDEGIECTNNATLVEAGAEPCMSTDHNWLVVILLVIFLLVTNILLV
NLLIAMFSHTFSKVQEHSDNYWKFQRYNLIVEYHSRPCLAPPFILISHLHLIIKRHIRKI
PSTKIKHFVLEIHGREASRLNTWEAIQKENILFAQNKREREKDSERLKRTSVKVDNVLKQ
MAEIRDHDRRLRMLETELEYCSSALSWMTEALSQSNLVKTTRPPPALRDLTSLSPTS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatacggataaaaggcatgaaggaggcggaaggagaacgggaacagaaaaatca
gagaaagatcagagctggatccccaagatcatcaaaaagagagtttgcaccacgttcgta
gaggactcattaagcaatggggtgttgtgtcagtgtggcggtgtgcgggagacacactgc
tccatcgctacaggagacttcttcggggcggccatcgtcagccagtgggacagctctcag
cactcctcagagtaccccaccgacgccttcggcgagttggagttcgcaggggccggcagg
agacacagccatttcctgcgtttgtcatgcgacaccccacctcatatcatatacagcctg
atgacggcccattggggggtgccctcccctaacctggtggtttctgtggtgggtggtcgc
gagaaggtcaagccctgggtgagggaagtgctgagacaggggcttgtcagggcggcacag
agcacaggggcgtggatagtgacgggggggctgagggagggggtgggacgttgtgttggg
gaagcagtgagggatcatgcggcggcggcctcctccctgtcccagaagaaagtcattgct
gtgggcgtggccccctgggggttggtgcacaacaggcagtggctcgtcaactctgagggt
agttttccagcacggtattatgtccagaacacgtcccatgactcgtgctgcctggatagt
aactaccaggccttcctgctggtggatgatgggagtgtaggccagcggggaggggaaacg
gccttccgggccaagatggaggactacatctcccaccagcgcacaggcatctggggcagt
ggcagtatagatgtccctgtattgtgtatgctcatctcaggggacgctgccatgctggag
agggtggatctctctctgaagaaggctactccctggctggtgttgaatggttctggtcca
gcggcggatctcatctgtgagctgctggatgcactgtcagccgggcccatgagcccccct
tctccccagccagaggttgaggggagcgagaagaccagtgcggagctgcgcgacagagcc
cgtgagagggtccggagacacttccctgccaaggcagacctggagaagcttgtggacagg
gctctgagtatctataaaaacagagatctgatcacagtgttccacggggagcaggagagt
tctgatgattttgacacagtgctactgaaggctctcgtcagagccagtaaacgtgtgtcc
agcgatgccagtgagtacacagaggagctgaagctagcagtagcctggaacagggtggac
atcgctaagagtgaactcttcaacggagacatccaatggaagtacgaggacctggaggac
tccatgacggatgcgctgatcaacgacaagccccagttcatacgtctcttcaacgagaac
ggcctcaacatcctggactacctaacctacaggcatctggaggtcctgtaccgctcgctg
tccgacagttctctggccttcactctgctccagcggcttctcacagagagacagggcctg
gccatatgctctccgaaagaggccgtagccctcaagagcccccagaaccccatgagcccc
ctatcaggaccctcctctgtcaaagagctcagcttgtatgaggtgtcacggcttttatgg
gacatcctgggagatgtgtgtgagcccttctactacagtcttctcggtttggaccagagc
gccagcaccaggagagcactgaagcaagtgaataagttgttgcagggggattgttcgtac
agggagcagagctgtctctatccgtgggcctctctgttcatctgggctgtgctgcagaac
cgcagcgagatggccgtctacttctgggagatggcaggggagtctgtccacagtgctctg
gcaggctgtaagattctgagggagctgtctaagctggagagtgagacagagaccaagctc
tctatgaaggagctggcccagaagtttgagaacttggccctcgatgtgttcagtgagtgc
taccagagcagtgagagtcgctccttcaccctccttataaggcagtctccggtgtggggc
aaagctacctgtctacagatggccacctcagccgacgcccgccacttcttcagccacgat
ggcgtgcagtctctgctgtctcagatctggtggggagacatgaagaggagcacgaaggtc
tggaaactggtcctctccttcttcttaccccccctcatctacaccaacctcatcagcttt
agggaacatgaggaagaggtgaggtcagaggaggtacctcttggtcgagacacagagagt
ctggacggaggagatgccactatgctctccctctccgacatcatgcaaacggaagaggac
gtcgaggaatatgctgctctaagggacaatctgaaaagtgccccctcttccaatcccaag
aggcccttcgtattgctgcgctggagggagttctggtttgcgcccgtcacctcgttccta
ggcaacgtgctgatgtacttcctgttcctcatcctgtttgcttatatcctattgttggac
ttcaagcccccgccgcctcacggcccgtccaccttagagtttgttctatacttctgggtc
ttcaccatggtctgtgaggagattcgacagacattcttcaggggcaacaccactttatat
cagagaatgaagctctacattgaggacatgtggaataagtgtgacatcacagccatctca
ctctttgcactgggaatgtgctgcagaatgttcccgtggtcctatgagtttggccgtgct
gtgttggctgtggactacatggtgtttaccctccgtctcatccacatcttcgccatccac
aaacagctgggacccaagataatcattgttgagaaaatgatgaaagacatattcttcttc
ctgttcttcctggcggtgtggctcctggcctacggcgtagccaatcaggcgctgctctac
tcctacgacccccgtcccggttggatatttcgcagagtgttctacaggccatacctacac
atatttggacagatccccatacacgaaatggatgctgataaactggatgaggggatagag
tgcaccaataacgccactctggtcgaggcgggggcagagccctgcatgagtaccgaccac
aattggctggtggtcatcttattggtcatcttcctgctggtcaccaacatcctcctggtc
aacctgctcatcgccatgttcagtcacacgttctccaaagtgcaggagcacagcgacaac
tactggaagttccagcgctacaatctgatcgtggagtatcactccagaccctgcctggca
ccacccttcatcctcatctcccacctccacctcatcatcaagagacacatccgcaagatc
ccctccacgaagatcaaacactttgttctggagatccatggtagggaggccagtagactg
aacacgtgggaggccatccagaaggagaatatactctttgcccagaacaaacgagagaga
gagaaagactcagagagactcaaacgcacctccgtcaaggtggacaatgtattaaagcag
atggcagagattcgggaccacgaccgcaggctgagaatgttggagaccgagttggagtac
tgttctagtgccctctcctggatgacggaggctctctctcagagtaacttggtaaagacc
acacgtcctccgcccgctctcagagatctgacctctctctctccaactagctga
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integrated database retrieval system
