Oncorhynchus kisutch (coho salmon): 109893512
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Entry
109893512 CDS
T09179
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03272
Virion - Hepatitis viruses
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109893512
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109893512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109893512
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109893512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
Motif
Other DBs
NCBI-GeneID:
109893512
NCBI-ProteinID:
XP_031690421
Ensembl:
ENSOKIG00005022079
UniProt:
A0A8C7H326
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All DBs
Position
LG10:61723784..61735851
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AA seq
880 aa
AA seq
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MGRLLCVLLVFLACCVVQTNTETVCGIGQFLCGNGKCITLRWVCDDTDDCGDGTDELPGT
CSARTCRTTEFSCGGHLNQCVPSTWLCDGKADCENGADEESCAPKHCTDNKFHCSNGQCV
SASFVCDEELDCDDGSDEASCPPTTCSSTSFQCTNSVCVPHLWACDGDTDCSDGSDEWPQ
NCGTRAPGGAPKPCSLREFQCGSGECIHSSWKCDGGFDCLDRSDETNCSRLTCRPDEFQC
GDGTCIHGGRQCNRQYDCRDLSDEMGCVNVSHCKGPTRFKCRSGECISMEKVCDKQRDCR
DWSDEPLRECDSNECLYNNGGCSHICNDLKFGYECQCPTGYYLTDKKRCEDIDECANPDI
CSQICVNHMGSYKCECEEGYQVDPATKACKAIGTVAYLFFTNRHEVRKMTLDKSEYTRVI
PHLKNAVALDMDMVAKEIYWSDLSQKKIYSTSMDLAADTAQHKVVIDSDIEAPEGIAFDW
VHGNIYWTDSIRSSISVSTANGSRRKTLFQNDLAKPRSIVVDPHSNFMYWTDWGTPAKIE
KGGLNGGDRAALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEH
RLAHPLGITVFEERVFWTDVSNNAILSANRVTGRDIKPVAEHLVSPEDIVLYHNLKQPTG
RDWCKVANGGCEFMCLAAPQVGLHSPKYTCACPDNMLLAKDMRKCVPAAPTPATPVKPIV
PSPNPPPAPAHTSPAPPARATTKAPIIATTVTPAPPRTTKPVPRNPQPAQPDTPRIPQAQ
TTTVPQVTTQDIRHEFAAIPTAPSTPAALYIALPIAIVCLVAFVAVLLWRNYRLKNTNTI
HFENPVYQKTTEDQVHICRSHSPDGYSYPPRQIVSLDDEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctgctgtgcgtgctgttggtgttcctggcttgctgtgttgtccaaacaaac
acagagacagtatgcgggatcgggcagttcctgtgtgggaacgggaagtgcattacgctg
agatgggtgtgtgatgacacagatgattgtggagatggaactgacgagctccccggaacc
tgctcggccagaacatgcagaaccacagagttcagctgtggtggacatctgaaccagtgt
gttcccagtacctggctctgtgacggcaaagcagactgtgagaatggagctgatgaggag
agctgtgcgcccaagcactgcacagataacaaattccactgcagtaacggccagtgtgtg
tcggcctcctttgtgtgtgatgaggagttggactgtgatgatgggagcgacgaggcttcc
tgcccacccaccacctgtagctccacctccttccagtgcaccaactctgtatgtgtgccg
cacctgtgggcctgcgacggggacactgactgctcggatggctcagacgagtggccccag
aactgtgggacgcgagcccctgggggtgcccccaagccctgctcccttcgggagttccaa
tgtggcagcggggagtgtatccacagcagctggaaatgtgatggaggattcgactgcctg
gatcgctctgatgagaccaactgtagccgcctcacctgccgccccgatgagttccaatgc
ggtgatggcacctgtatccacggcggtcgccaatgtaaccgccagtacgactgcagagac
ttgagtgatgaaatgggctgtgtcaatgtgagccattgcaagggtcccaccaggtttaag
tgccgtagtggggagtgcatcagtatggagaaggtgtgtgacaagcagcgtgactgtagg
gactggtcagatgagcctctcagagagtgtgattccaacgagtgcctgtacaacaatggc
ggctgctcacacatctgcaatgacctgaagttcggctatgagtgccaatgccccaccggc
tactacctgacggacaagaaacgctgtgaagatatcgatgagtgtgccaacccagacatc
tgcagccagatctgtgtcaatcatatgggcagctacaagtgtgagtgtgaggagggctac
caggtcgacccagcgaccaaagcctgcaaggccatcggcactgtagcctatctgttcttc
accaatcgccatgaggtgaggaagatgacactggacaagagtgagtacacgcgtgtcatc
ccccacctgaagaatgcagtggctctggacatggacatggttgccaaggagatttactgg
tctgacctctcccagaagaagatctacagcacctcaatggacttggctgcagacacagcg
caacacaaagttgtgattgacagtgacatcgaagctccggagggcatcgcctttgactgg
gtccacggcaacatctactggaccgacagtatccgcagcagcatctctgtgtcaaccgcc
aatgggagccgtcgcaagactctcttccagaatgacctggccaagccccgctctattgtg
gtcgacccccacagcaatttcatgtactggactgactggggaactccagccaagattgag
aagggaggtctgaacggaggagaccgtgctgctctggtcacagacaacattgtgtggccc
aatggaatcacccttgacctgctgaaccagcggctgtactgggtcgactccaagctgcac
accctctccagtatcgacgtccagggtggcggccgaaggacactcattatagatgaacac
aggctagcccatcccctaggcatcactgtgtttgaggaaagagtgttttggacagatgtc
agcaacaatgccattctgagtgccaaccgtgtgacaggcagggacatcaagcctgtggca
gagcacctggtatccccagaggacattgtgttgtaccacaacctcaaacagccaactggc
agggactggtgcaaggtggccaacggaggctgtgagttcatgtgtctggcagccccccag
gtgggcctacattcccccaagtacacctgtgcatgccctgacaacatgctgctggccaaa
gacatgaggaaatgtgtaccagctgcaccaacacctgcaactccagtcaagcccattgtt
ccctcccccaaccccccaccggcacccgcccacacctcccctgcacctccagcccgcgcc
accactaaggcccccatcatcgctaccacagttacgcctgcgcctccccgcactaccaaa
cctgtgccacgcaacccccagcctgcccagccagatacacccaggatcccccaggcccag
actaccacagtgcctcaagtcaccactcaggacatccgccatgaatttgctgctataccc
acagccccttcaacccctgcagctttatacatcgcgctgcctatagccattgtgtgtctg
gtggcctttgttgccgtgcttctgtggaggaactacagactgaagaacaccaacaccatt
cactttgaaaacccagtctaccagaagaccactgaagaccaggtgcacatatgcaggagc
cacagtccagacggctactcctacccaccgagacagattgtgagtcttgatgatgaggct
tga
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