KEGG   Oncorhynchus kisutch (coho salmon): 109894124
Entry
109894124         CDS       T09179                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki00052  Galactose metabolism
oki00510  N-Glycan biosynthesis
oki00513  Various types of N-glycan biosynthesis
oki00514  Other types of O-glycan biosynthesis
oki00515  Mannose type O-glycan biosynthesis
oki00533  Glycosaminoglycan biosynthesis - keratan sulfate
oki00601  Glycosphingolipid biosynthesis - lacto and neolacto series
oki01100  Metabolic pathways
Module
oki_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
oki_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:oki00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    109894124
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    109894124
   00513 Various types of N-glycan biosynthesis
    109894124
   00515 Mannose type O-glycan biosynthesis
    109894124
   00514 Other types of O-glycan biosynthesis
    109894124
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    109894124
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    109894124
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:oki01003]
    109894124
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109894124
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109894124
Enzymes [BR:oki01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     109894124
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     109894124
    2.4.1.90  N-acetyllactosamine synthase
     109894124
Glycosyltransferases [BR:oki01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   109894124
Membrane trafficking [BR:oki04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    109894124
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   109894124
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 109894124
NCBI-ProteinID: XP_020342942
Ensembl: ENSOKIG00005011916
LinkDB
Position
LG7:complement(7907149..7915788)
AA seq 382 aa
MLDSSLNFRLRKKGWTVVVVLGVINLLVVLFYLTGYSNGLSANKQIKTQTRIETAFITVT
LPPQDNGQHDLNNSIVILRTPKFKDIHLPNTATTTTTTTTNTTSTTTLWNKFEKCPDPSP
HLVGPLRVEFSTPVSLDTVRKENPGLQGGGRYKPQDCAALQKVALIIPFRHRDDHLKFWL
YYLHPILQRQQLDYGVYVINQDGDDTFNRAKLMNIGYAEALKEYDYDCFVFSDVDIIPMD
DRNPYKCFSQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQFLEINGFPNNYWGWGGEDD
DIFNRLSSRGMSISRPDGEVGKCRMIRHERDKLNDPNPQRFDRIQRTRLTINTDGISSLK
YKVVKVEKDALFTKITVDVGKP
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgctcgactcatctctcaactttaggctgcggaagaaaggctggaccgtggttgtagtt
ttaggtgttattaatctcttagtggttttattttatttaacgggttactcgaatgggttg
tcagcaaacaaacaaataaagacacagacgcgaattgaaacagcttttattaccgtgaca
cttccaccgcaagataatggacaacacgaccttaataacagcattgtaatattgcgaact
ccgaagtttaaggatatacatttacccaatacagctactacaactactacaacaactact
aacactacttctactacaactttgtggaataagtttgaaaaatgtcctgatccgtctcct
catctggtggggcctctcagggtggagttctctacgcctgtcagcttggacacagtgagg
aaggagaacccaggtctgcagggaggaggtcgctacaaaccacaagactgcgccgccctc
caaaaggttgctctaatcatccccttccgccatcgcgacgatcacctcaagttctggctc
tactacctccatcccatccttcagcgccaacagctggactacggcgtctacgtcatcaat
caggatggagacgacacattcaacagggccaagctgatgaacattggctatgctgaggcc
ctgaaagagtatgactacgactgctttgtgttcagtgacgtggacatcatccccatggat
gaccgcaacccctacaaatgcttcagccagcccagacacctgtctgtctccatggacaag
tttggcttcaagttgccctataaccagtactttggcggtgtctcagcgttaagtaaggag
cagttcctggaaatcaacggctttcccaacaactactggggctggggtggtgaagatgac
gacattttcaacaggttgagctccagaggaatgtccatctctcgtccagatggcgaggtc
ggaaaatgccggatgatccgtcacgagagagacaaactgaacgacccaaatcctcagagg
tttgacagaatacaacgcacaagactgacgataaatacagatgggatcagctctctcaag
tacaaagtcgtcaaagtggaaaaggatgctctgttcacgaaaatcacagtagatgtgggg
aaaccttag

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