Oncorhynchus kisutch (coho salmon): 109894124
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Entry
109894124 CDS
T09179
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00052
Galactose metabolism
oki00510
N-Glycan biosynthesis
oki00513
Various types of N-glycan biosynthesis
oki00514
Other types of O-glycan biosynthesis
oki00515
Mannose type O-glycan biosynthesis
oki00533
Glycosaminoglycan biosynthesis - keratan sulfate
oki00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oki01100
Metabolic pathways
Module
oki_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
oki_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
109894124
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
109894124
00513 Various types of N-glycan biosynthesis
109894124
00515 Mannose type O-glycan biosynthesis
109894124
00514 Other types of O-glycan biosynthesis
109894124
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109894124
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109894124
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109894124
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109894124
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109894124
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
109894124
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
109894124
2.4.1.90 N-acetyllactosamine synthase
109894124
Glycosyltransferases [BR:
oki01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109894124
Membrane trafficking [BR:
oki04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109894124
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of breast milk
109894124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
109894124
NCBI-ProteinID:
XP_020342942
Ensembl:
ENSOKIG00005011916
LinkDB
All DBs
Position
LG7:complement(7907149..7915788)
Genome browser
AA seq
382 aa
AA seq
DB search
MLDSSLNFRLRKKGWTVVVVLGVINLLVVLFYLTGYSNGLSANKQIKTQTRIETAFITVT
LPPQDNGQHDLNNSIVILRTPKFKDIHLPNTATTTTTTTTNTTSTTTLWNKFEKCPDPSP
HLVGPLRVEFSTPVSLDTVRKENPGLQGGGRYKPQDCAALQKVALIIPFRHRDDHLKFWL
YYLHPILQRQQLDYGVYVINQDGDDTFNRAKLMNIGYAEALKEYDYDCFVFSDVDIIPMD
DRNPYKCFSQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQFLEINGFPNNYWGWGGEDD
DIFNRLSSRGMSISRPDGEVGKCRMIRHERDKLNDPNPQRFDRIQRTRLTINTDGISSLK
YKVVKVEKDALFTKITVDVGKP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactcatctctcaactttaggctgcggaagaaaggctggaccgtggttgtagtt
ttaggtgttattaatctcttagtggttttattttatttaacgggttactcgaatgggttg
tcagcaaacaaacaaataaagacacagacgcgaattgaaacagcttttattaccgtgaca
cttccaccgcaagataatggacaacacgaccttaataacagcattgtaatattgcgaact
ccgaagtttaaggatatacatttacccaatacagctactacaactactacaacaactact
aacactacttctactacaactttgtggaataagtttgaaaaatgtcctgatccgtctcct
catctggtggggcctctcagggtggagttctctacgcctgtcagcttggacacagtgagg
aaggagaacccaggtctgcagggaggaggtcgctacaaaccacaagactgcgccgccctc
caaaaggttgctctaatcatccccttccgccatcgcgacgatcacctcaagttctggctc
tactacctccatcccatccttcagcgccaacagctggactacggcgtctacgtcatcaat
caggatggagacgacacattcaacagggccaagctgatgaacattggctatgctgaggcc
ctgaaagagtatgactacgactgctttgtgttcagtgacgtggacatcatccccatggat
gaccgcaacccctacaaatgcttcagccagcccagacacctgtctgtctccatggacaag
tttggcttcaagttgccctataaccagtactttggcggtgtctcagcgttaagtaaggag
cagttcctggaaatcaacggctttcccaacaactactggggctggggtggtgaagatgac
gacattttcaacaggttgagctccagaggaatgtccatctctcgtccagatggcgaggtc
ggaaaatgccggatgatccgtcacgagagagacaaactgaacgacccaaatcctcagagg
tttgacagaatacaacgcacaagactgacgataaatacagatgggatcagctctctcaag
tacaaagtcgtcaaagtggaaaaggatgctctgttcacgaaaatcacagtagatgtgggg
aaaccttag
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